DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and gbx2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:320 Identity:89/320 - (27%)
Similarity:127/320 - (39%) Gaps:87/320 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PGNNPYAHHPMPPHLLAHFPPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGHGLTGD 231
            ||:..|..:||       |.|....||...         |.|....|.:..|...|.| |.:.|.
Zfish    36 PGHFVYTGYPM-------FMPYRSVVLPPP---------PPPPPPTLPQSALPTTHPH-HPIPGL 83

  Fly   232 PAQHLSHL------------------SHLSHQQHHPHLH-------HPMHDERSRSPLMLQQLGG 271
            |:...|.|                  |....|||.....       |.|.|:....     :|.|
Zfish    84 PSSFCSSLAQGMALTSTLMATLPGGFSSSPSQQHQDAARKLGSQSIHAMFDKSQDI-----RLDG 143

  Fly   272 NGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQA 336
            ..|......:::|..|     .::|.|.:::.:.|:|...:..:.....:       .|.|.|  
Zfish   144 EDGKTFATKDSTSIPS-----FHDSQSVHTSTVRGHSKDDSKEDDCHRKD-------ESFSMD-- 194

  Fly   337 STIDDSDSDD------CGGKDDDG----DDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQ 391
            |.:|.|..|:      |..:|.||    ||.:..|:.|...:|       :.|.|:.|||||..|
Zfish   195 SDLDYSSDDNGPGNAMCQKEDGDGSGGLDDGVHGGNGAGNTTS-------TGKNRRRRTAFTSEQ 252

  Fly   392 LQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGN 451
            |..|||.|..:||||:.:|.::|:.|:||:.|||.|:||||.||||         .:|||
Zfish   253 LLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR---------VKAGN 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 31/55 (56%)
gbx2NP_694496.1 Homeodomain 242..298 CDD:459649 31/55 (56%)

Return to query results.
Submit another query.