DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Gbx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:445 Identity:102/445 - (22%)
Similarity:144/445 - (32%) Gaps:190/445 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PSATAHHPAAVGGGMPRPASPAVG-----SNTTTATATTATRSRFMITDILAGAAAASAAAAAAA 79
            |.|.|  ||.:..|:| |.:|...     |||..|....|..|...:|..|...|....|.....
Mouse   117 PQALA--PAPLPAGLP-PLAPLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAYYGPP 178

  Fly    80 AALAAASSGGGRGSPTDSEREQSLVAQHHHHHQQQQQHHHHQQQQQQQQHQQAALQQYIVQQQQL 144
            ...|||:|...|.:|..:.|                             ....||     ..::|
Mouse   179 ELAAAAASTASRSNPEPAAR-----------------------------RTDGAL-----DAEEL 209

  Fly   145 LRFEREREREREREHYRERHSPPGNNPYAHHPMPPHLLAHFP--PAHYAVLQQQQQQQQQQQHPH 207
            |     ..||:..|      .||        |.|||....||  ||...|...            
Mouse   210 L-----PAREKVTE------PPP--------PPPPHFSETFPSLPAEGKVYSS------------ 243

  Fly   208 PHHLQLERERLEALHRHGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGN 272
                  :.|:||.       ..||||.        |.|:..                      |:
Mouse   244 ------DEEKLEP-------PAGDPAG--------SEQEEE----------------------GS 265

  Fly   273 GGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQAS 337
            ||::.::..:||:                                       ||||:.:      
Mouse   266 GGDSEDSFLDSSA---------------------------------------GGPGALL------ 285

  Fly   338 TIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSK---KQRKARTAFTDHQLQTLEKSF 399
                      |.|     ..:|.......:..:.::..::.   |.|:.|||||..||..|||.|
Mouse   286 ----------GPK-----PKLKGSPGTGAEEGTPVATGVTTPGGKSRRRRTAFTSEQLLELEKEF 335

  Fly   400 ERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAA 454
            ..:||||:.:|.::|:.|:||:.|||.|:||||.||||         .:|||.::
Mouse   336 HCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR---------IKAGNVSS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 31/55 (56%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 36/234 (15%)
Homeodomain 317..373 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

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