DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and Dbx2

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_997416.2 Gene:Dbx2 / 223843 MGIID:107445 Length:377 Species:Mus musculus


Alignment Length:98 Identity:37/98 - (37%)
Similarity:51/98 - (52%) Gaps:15/98 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 CGGKDDDGDDSMKNGSSANGDSSSHLSLSL-----SKKQRKA---RTAFTDHQLQTLEKSFERQK 403
            |||       |.:..:|....|.....|.|     :.|.|:.   |..|::.|.:.|||.|::||
Mouse   192 CGG-------SCRRPASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEEQRKALEKMFQKQK 249

  Fly   404 YLSVQDRMELANKLELSDCQVKTWYQNRRTKWK 436
            |:|..||.:||..|.|.:.|||.|:||||.||:
Mouse   250 YISKTDRRKLAVSLGLKESQVKIWFQNRRMKWR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 26/51 (51%)
Dbx2NP_997416.2 COG5576 <217..334 CDD:227863 29/66 (44%)
Homeobox 229..282 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.