DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Tlx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_006526978.1 Gene:Tlx1 / 21908 MGIID:98769 Length:345 Species:Mus musculus


Alignment Length:322 Identity:81/322 - (25%)
Similarity:107/322 - (33%) Gaps:125/322 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 LSHLSHQQHHPHLHHPMH--------DERSRSP---------LMLQQ----LG---------GNG 273
            :.||.     ||..||.|        |:...||         ..||.    ||         |.|
Mouse     1 MEHLG-----PHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGDYGLGCLVGGAYTYGGG 60

  Fly   274 GNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNM-LLGGPGSSISGDQAS 337
            |:........:.|............|..   .|.:.|.....||.|.|| |.||||....|    
Mouse    61 GSAAGAGAGGTGAYGAGGPGGPGGPAGG---GGGACSMGPLPGSYNVNMALAGGPGPGGGG---- 118

  Fly   338 TIDDSDSDDCGGKDDDGDDSMK-------------NGSSANGD---------------------- 367
                      ||....|..::.             .|:.|:..                      
Mouse   119 ----------GGGGAGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAVPGVNNLT 173

  Fly   368 -------------SSSHLSLSLS-----------------KKQRKARTAFTDHQLQTLEKSFERQ 402
                         :....:::||                 .|::|.||:||..|:..|||.|.||
Mouse   174 GLTFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQ 238

  Fly   403 KYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGN-------YAAFQR 457
            |||:..:|..||..|:::|.|||||:|||||||:||||...|...:..|       ..|||:
Mouse   239 KYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 32/55 (58%)
Tlx1XP_006526978.1 Homeodomain 217..273 CDD:459649 32/55 (58%)

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