DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and ceh-1

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_508796.2 Gene:ceh-1 / 191614 WormBaseID:WBGene00000428 Length:171 Species:Caenorhabditis elegans


Alignment Length:193 Identity:59/193 - (30%)
Similarity:81/193 - (41%) Gaps:60/193 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 KDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 414
            ||.:.|::....|.|:|..||.     ..|.|:||||||..||..||..|:..:||||.:|:.||
 Worm    15 KDSNSDEATHQKSPADGGKSSR-----KLKMRRARTAFTYEQLVALENKFKTSRYLSVVERLNLA 74

  Fly   415 NKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQS 479
            .:|:||:.|||.|:||||||||:..                              |...|...|:
 Worm    75 IQLQLSETQVKIWFQNRRTKWKKHN------------------------------PGQDANTPQT 109

  Fly   480 PHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPP--PPGAAPMLSG 540
            |..:..:.|              :|.|||:         |..|...:..||  .|..:.:|.|
 Worm   110 PPSSDETQI--------------QPILPAN---------PITSFSSLLLPPIISPANSAVLQG 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 30/51 (59%)
ceh-1NP_508796.2 COG5576 2..118 CDD:227863 47/137 (34%)
Homeobox 44..96 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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