DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and ceh-62

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_496326.2 Gene:ceh-62 / 187642 WormBaseID:WBGene00011069 Length:278 Species:Caenorhabditis elegans


Alignment Length:192 Identity:48/192 - (25%)
Similarity:75/192 - (39%) Gaps:28/192 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAV 441
            ::|.|:.||.|:..|...||..:....|::.:.|..||..|:||:.|||||:||||.|.||.   
 Worm    93 NEKSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRRAKDKRD--- 154

  Fly   442 GLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAMQKPSL 506
              .....|.|:.:..|   .::|...:...:.....|:.....|:.|........|.:|:..|:.
 Worm   155 --RKSENASNHTSNSR---RSSPSRKSSSDSTPTPTQATQFDMPTQIQTASPPTTADSAIFPPTS 214

  Fly   507 PASYRMYQSSIPPGMSLPG--------------------MPAPPPPGAAPMLSGYYAAAAAA 548
            |.|........|....||.                    :|:.||.....||..:.:...:|
 Worm   215 PESIIQKIEQFPSNQILPNFDILQTYLQSLSSSQIPLQFVPSTPPLFDPNMLVNFQSPLQSA 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 24/55 (44%)
ceh-62NP_496326.2 Homeodomain 97..153 CDD:459649 24/55 (44%)

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