DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Npm1

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_032748.1 Gene:Npm1 / 18148 MGIID:106184 Length:292 Species:Mus musculus


Alignment Length:155 Identity:37/155 - (23%)
Similarity:63/155 - (40%) Gaps:41/155 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 AAAMQKPSLP-----ASYRMYQSSIPPGMSLPGMPAPPPP------GAAPM-LSGYYAAAAAAAA 550
            |.||.....|     |:.:|   |:.|.:||.|....||.      |:.|: :||.:..|.    
Mouse    62 AEAMNYEGSPIKVTLATLKM---SVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV---- 119

  Fly   551 SAGAQQQQQQPPAASRSPATSQSANSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEDR 615
                           ...|.|:..:.| |.:....|.::     |.| ..|:...::::..:||.
Mouse   120 ---------------EEDAESEDEDEE-DVKLLGMSGKR-----SAP-GGGNKVPQKKVKLDEDD 162

  Fly   616 ERDEERDIERERERERERDEDDEEE 640
            |.|:|.|.:.|.:.:.:.||::.||
Mouse   163 EDDDEDDEDDEDDDDDDFDEEETEE 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475
Npm1NP_032748.1 Required for interaction with SENP3. /evidence=ECO:0000250 1..185 35/151 (23%)
Necessary for interaction with APEX1. /evidence=ECO:0000250 1..117 17/57 (30%)
Nucleoplasmin 18..116 CDD:308605 17/56 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..248 15/56 (27%)
Nuclear localization signal. /evidence=ECO:0000255 152..157 0/4 (0%)
Nuclear localization signal. /evidence=ECO:0000255 190..196
Required for nucleolar localization. /evidence=ECO:0000250 241..292
NPM1-C 243..291 CDD:318505
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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