DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and ceh-51

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_507685.1 Gene:ceh-51 / 180233 WormBaseID:WBGene00013583 Length:234 Species:Caenorhabditis elegans


Alignment Length:218 Identity:48/218 - (22%)
Similarity:81/218 - (37%) Gaps:65/218 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 NGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQA 336
            :..|.|.||.......:::|.|:.||..|:.::..::..|::             || |:|...|
 Worm     2 SSSNYNINNGGDYYPLSSSNLNSTSAITNATVMEYSTMPSSS-------------PG-SMSSSPA 52

  Fly   337 STIDDSDSDDCGGKD-----------DDGDDSM-----------------KNGSSANGDSSSHLS 373
            ..........|...|           .:|:|.:                 :..|..:..|..|..
 Worm    53 YPAAYQAPSPCYVADPNQLYYQQQLAHNGNDMLVQAHAQAYQAQCFAWFQQQYSQLSPSSFPHPM 117

  Fly   374 L-----------------------SLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELAN 415
            :                       :.|:|:|.|||.|:|.||..|...||:...:.|.:|.:|..
 Worm   118 VAHHAGFIPPPPSFLHHQHQQHPRAPSEKRRGARTPFSDSQLYALRTRFEQCDTIKVDERRKLGA 182

  Fly   416 KLELSDCQVKTWYQNRRTKWKRQ 438
            .:.||..|:|.|:||||.|.:::
 Worm   183 VIGLSPEQIKIWFQNRRFKLRKE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 24/55 (44%)
ceh-51NP_507685.1 Homeodomain 148..204 CDD:459649 24/55 (44%)

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