DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Lbx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_034821.2 Gene:Lbx1 / 16814 MGIID:104867 Length:282 Species:Mus musculus


Alignment Length:257 Identity:73/257 - (28%)
Similarity:95/257 - (36%) Gaps:108/257 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVG 442
            ||:||:|||||:||:..|||.|..|||||..||.::|.:|.|::.||.||:||||.|.||...  
Mouse   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLE-- 185

  Fly   443 LELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAA-------- 499
             |:.|:                       ..:|....|.|...........|.:.|:        
Mouse   186 -EMKAD-----------------------VESAKKLGPSGQMDIVALAELEQNSEASGGGGGGGC 226

  Fly   500 --AMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAASAGAQQQQQQPP 562
              |..:|..||        :|||       ||..||..|:                     |..|
Mouse   227 GRAKSRPGSPA--------LPPG-------APQAPGGGPL---------------------QLSP 255

  Fly   563 AASRSPATSQSANSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEDRERDEERDIE 624
            |   ||.|.|.|:|: ||                               .|| |.|||.|::
Mouse   256 A---SPLTDQRASSQ-DC-------------------------------SED-EEDEEIDVD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 32/55 (58%)
Lbx1NP_034821.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Homeodomain 126..182 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..282 32/144 (22%)
Blue background indicates that the domain is not in the aligned region.

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