DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Hoxd4

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_034599.2 Gene:Hoxd4 / 15436 MGIID:96208 Length:250 Species:Mus musculus


Alignment Length:57 Identity:27/57 - (47%)
Similarity:42/57 - (73%) Gaps:0/57 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 RKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKR 437
            :::|||:|..|:..|||.|...:||:.:.|:|:|:.|.||:.|:|.|:||||.|||:
Mouse   153 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
Hoxd4NP_034599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..126
Antp-type hexapeptide 131..136
Homeodomain 153..209 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..250 27/57 (47%)
Blue background indicates that the domain is not in the aligned region.

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