DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Hoxb5

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:238 Identity:66/238 - (27%)
Similarity:102/238 - (42%) Gaps:46/238 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 RSPLMLQQLGGNGGNNNNNNN---NSSSASNNN------NNNNNSASANS----NIISGNSSSSN 312
            |.|..:..  |:.|.|.|..:   |.||||:::      ::....|||..    ...|..|.||.
Mouse    35 RDPAAMHT--GSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPASAQEPRFRQATSSCSLSSP 97

  Fly   313 NNNGSGNGNMLLGGPGSSISGDQASTIDDS------DSDDCGGKDDDGDDSMKNGSSANGDSSS- 370
            .:....||:.....|.:|...|||:....|      |......:.::....:.:.|.|...... 
Mouse    98 ESLPCTNGDSHGAKPSASSPSDQATPASSSANFTEIDEASASSEPEEAASQLSSPSLARAQPEPM 162

  Fly   371 ---------------------HLSLSLSKKQ-RKARTAFTDHQLQTLEKSFERQKYLSVQDRMEL 413
                                 |:|..::... ::||||:|.:|...|||.|...:||:.:.|:|:
Mouse   163 ATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 227

  Fly   414 ANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQ 456
            |:.|.||:.|:|.|:||||.|||:...:....||.||  :|||
Mouse   228 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAG--SAFQ 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 27/55 (49%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 18/103 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 18/97 (19%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 195..251 CDD:459649 27/55 (49%)

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