DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and gbx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_777286.1 Gene:gbx1 / 142985 ZFINID:ZDB-GENE-020117-2 Length:316 Species:Danio rerio


Alignment Length:217 Identity:60/217 - (27%)
Similarity:93/217 - (42%) Gaps:69/217 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 HQQHHPHLHHPMHDERSRSPLM-----LQQLGGN----GGNNNNNNNNSSSASNNNNNNNNSASA 299
            ::|..|      |||...|.|:     .|.:.|.    ..::...:..::.|:.::..::::.|.
Zfish   120 NRQESP------HDELKGSELLNFTETFQAVAGETKLYSSDDEKLDLKAAEAACSDREDSSADSE 178

  Fly   300 NSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSA 364
            |.:...||:.:|.:..|.     |.||                           ..|::..|.||
Zfish   179 NESFSDGNTCASASQKGK-----LKGG---------------------------SQDALPPGGSA 211

  Fly   365 NGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQ 429
            .             |.|:.|||||..||..|||.|..:||||:.:|.::|:.|:||:.|||.|:|
Zfish   212 G-------------KSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQ 263

  Fly   430 NRRTKWKRQTAVGLELLAEAGN 451
            |||.||||         .:|||
Zfish   264 NRRAKWKR---------IKAGN 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 31/55 (56%)
gbx1NP_777286.1 Homeodomain 215..271 CDD:459649 31/55 (56%)

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