DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Emx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_034261.2 Gene:Emx1 / 13796 MGIID:95387 Length:290 Species:Mus musculus


Alignment Length:248 Identity:65/248 - (26%)
Similarity:100/248 - (40%) Gaps:62/248 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 GGNGGNNNNNNNNSS----SASN-----NNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLG 325
            ||.||:..:....|.    :||.     ...|..:.::|.:..:||..:::    .:|.|..|.|
Mouse    53 GGTGGSPGSGGAGSHPLAVAASEEPLRPTALNYPHPSAAETAFVSGFPAAA----AAGAGRSLYG 113

  Fly   326 GP---------------------GSSISGDQASTIDDSDSDDCG-----------GKDDDGDDSM 358
            ||                     |||......|.......|...           |......|..
Mouse   114 GPELVFPEAMNHPALTVHPAHQLGSSSLQPPHSFFSAQHRDPLHFYPWVLRNRFFGHRFQASDVP 178

  Fly   359 KNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQ 423
            ::|...:|        ..::|.::.||||:..||..||::||:..|:...:|.:||..|.||:.|
Mouse   179 QDGLLLHG--------PFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQ 235

  Fly   424 VKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAA 476
            ||.|:||||||:|||.      |.|.|..:. |:..|  :.:::.|..|...|
Mouse   236 VKVWFQNRRTKYKRQK------LEEEGPESE-QKKKG--SHHINRWRIATKQA 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 27/55 (49%)
Emx1NP_034261.2 Homeodomain 193..249 CDD:459649 27/55 (49%)

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