DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Dbx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:250 Identity:65/250 - (26%)
Similarity:86/250 - (34%) Gaps:93/250 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 LSLSKKQRKA---RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKW 435
            |:...|.|:.   |..|:|.|.:.|||:|::|||:|..||.:||:||.|.|.|||.|:||||.||
Mouse   172 LAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKW 236

  Fly   436 KRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAA 500
            :....  .|||:..|                                                  
Mouse   237 RNSKE--RELLSSGG-------------------------------------------------- 249

  Fly   501 MQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAASAGAQQQQQQPPAAS 565
            .::.:||.....:......|...||......|||.   ..|:|.|.......|..      ||  
Mouse   250 CREQTLPTKLNPHPDLSDVGQKGPGDEEEDNPGAR---LAYHAPADPRHLLEGPL------PA-- 303

  Fly   566 RSPATSQSANSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEDRERDEE 620
             |||.|.|                          ||.|......:|:|:.|.|||
Mouse   304 -SPAHSSS--------------------------PGKPSDFSDSDEDEEGEEDEE 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 31/58 (53%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102
Homeodomain 184..238 CDD:459649 30/53 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 31/181 (17%)
Blue background indicates that the domain is not in the aligned region.

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