DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and LOC1277926

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_317438.4 Gene:LOC1277926 / 1277926 VectorBaseID:AGAMI1_003079 Length:596 Species:Anopheles gambiae


Alignment Length:618 Identity:136/618 - (22%)
Similarity:202/618 - (32%) Gaps:223/618 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SAPSATAHH-----PAAVGGGMPRPASPAVGSNTTTATATTATRSRFMITDILAGAAAASAAAAA 77
            ||||...||     |.:........|||.....|||:|.:|            :||:|||:....
Mosquito    11 SAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTST------------SGASAASSPTRD 63

  Fly    78 AAAALAAASSGGGRGSPTDSEREQSLVAQHHH---HHQQQQQHHHHQQQQQQQQHQQA---ALQQ 136
            ..:.:...|....:..|..|:........|||   ||.|...|.|||...|||...|.   |...
Mosquito    64 EMSLVVPISPLHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASIS 128

  Fly   137 YIVQQQQLLRFEREREREREREH-----YRERHSPPGNNPYAHHPMPPHLL--AHFP----PAHY 190
            :.:......||.:....::::.|     .||..||...:|....|.|.|:|  ||.|    ||::
Mosquito   129 FSITNILSDRFGKATAEQQQQPHPQSPAIREPISPGPIHPAVLLPYPQHVLHPAHHPALLHPAYH 193

  Fly   191 AVLQQQQQQQQQQQHPHPHHLQLER---ERLEALHR------------------------HGHGL 228
            ..|  ....|....||.|...|.:|   ||.::|.|                        |.:..
Mosquito   194 TGL--HHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLPLHPYHT 256

  Fly   229 TGD-----------PAQH-----------------------------------LSH----LSHLS 243
            ..|           ||.:                                   |.|    |:..|
Mosquito   257 DSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYSRKASALDHRAALLNGFS 321

  Fly   244 HQQHHPHLHHPMHDER---------------------------SRSPLMLQQLG---------GN 272
            ....:|.||..:.:..                           |.:|..:..||         |.
Mosquito   322 AAASYPKLHEEIINSHRKFQAKLIESQTKAALAAAATAAAAAASATPHNMPPLGSLCKTVSQIGQ 386

  Fly   273 GGNNNNNNNNSSSASNNNNNNNNSASANSN-----IISGNSSSSNNNNGSGNGNMLLGGPGSSIS 332
            ......:.|.|.||:|..:|..:.|.|.:.     |.....||..|.:.|.:..|          
Mosquito   387 HVAGTGSLNGSGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQDAGM---------- 441

  Fly   333 GDQASTIDDSDSDDCGGKDDDGDDSMKNGSS----------------------------ANGDSS 369
                     ..|||...:.....|..:|||:                            ..||| 
Mosquito   442 ---------ESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSDRPSSGPRYRRTKQPKEKGDS- 496

  Fly   370 SHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTK 434
                     ::::.||||::.|||.|:..|...:||:.:.|..|:.:|.|::.|:|.|:||:|.|
Mosquito   497 ---------EEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAELGLNEAQIKIWFQNKRAK 552

  Fly   435 WKRQTA----VGLELLAEAGNYAAFQRLYGGAT 463
            .|:.::    :.|:|:|        |.||..:|
Mosquito   553 IKKSSSEKNPLALQLMA--------QGLYNHST 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 22/55 (40%)
LOC1277926XP_317438.4 None

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