DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Scr

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_311616.2 Gene:Scr / 1272726 VectorBaseID:AGAMI1_014121 Length:372 Species:Anopheles gambiae


Alignment Length:414 Identity:97/414 - (23%)
Similarity:140/414 - (33%) Gaps:167/414 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 PPGNNPYAHHPMPPHLLAHFPP-------------------------------AHYAVLQQQQQQ 199
            ||.......:|..|| .||:.|                               ..|..||.|:..
Mosquito    47 PPSTYAPNIYPGTPH-QAHYSPQSYNPLAGAGATSVNSASTGAVGGGHQSTDMVDYTQLQPQKFL 110

  Fly   200 QQQQQHPHPHHLQLERERLEALHRHGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPL 264
            ..|||.|.                  ..||....::.|.                          
Mosquito   111 LSQQQQPQ------------------SALTSQSCKYASE-------------------------- 131

  Fly   265 MLQQLGGNGGNN--NNNNNNS-------------SSASNNNNNNNNS-----------ASANSNI 303
                 |.:.|.|  |||||||             ||.:|:.||....           .|.:.::
Mosquito   132 -----GPSTGTNVINNNNNNSTTSPQDLSTASGGSSGANDGNNGRPEISPKLSPGSVVESVSRSL 191

  Fly   304 ISGN-----SSSSNNNNGS-----GNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSM 358
            .|||     ||||.|||.|     ...|:.|..|      ::.|...|.||...||....|..| 
Mosquito   192 KSGNPSTAVSSSSTNNNTSNISNRNQVNLPLASP------EEESEASDDDSGTEGGSSQGGGGS- 249

  Fly   359 KNGSSANGDSSSHL------------SLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRM 411
               ||..|....|:            :::.:.:.::.||::|.:|...|||.|...:||:.:.|:
Mosquito   250 ---SSKKGGPPPHIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRI 311

  Fly   412 ELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAA 476
            |:|:.|.|::.|:|.|:||||.|||::..:.                      .::..||     
Mosquito   312 EIAHALCLTERQIKIWFQNRRMKWKKEHKMA----------------------SMNIVPY----- 349

  Fly   477 AQSPHGATPSAIDIYYRQAAAAAA 500
            ..||:| .|...||:..|.|..:|
Mosquito   350 HMSPYG-HPYQFDIHPSQFAHLSA 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 24/55 (44%)
ScrXP_311616.2 None

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