DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and LOC1272724

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_311623.3 Gene:LOC1272724 / 1272724 VectorBaseID:AGAMI1_000064 Length:327 Species:Anopheles gambiae


Alignment Length:299 Identity:67/299 - (22%)
Similarity:108/299 - (36%) Gaps:91/299 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 PHLHHPMHDERS--RSP------LMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIIS 305
            |:.:|.:|..|:  .||      ...:|: ..|..::.:.....::.||..:.:|          
Mosquito    51 PYTNHHLHQTRTAQESPYDASIQAACKQI-YEGSYSSKDCGTKGTSGNNGTDTSN---------- 104

  Fly   306 GNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTID------DSDSDDCGGKDDDGDDSMKNGSSA 364
            |.....|.|:|:.|| ...|..||::...|.|::.      ..||...|..|..|...:....||
Mosquito   105 GYKDVWNANSGATNG-ATTGATGSNVPAQQNSSVPVRPSACTPDSRVGGYIDASGGSPVSRAGSA 168

  Fly   365 ---------------------NGDSSSHLSLSLSKK----------------------------- 379
                                 .|.::....|..|..                             
Mosquito   169 AAAAGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTFYPWMAIAGKRYSESLAGTLLPDWIGAN 233

  Fly   380 --QRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVG 442
              :|:.|..:|.:|...|||.|....||:.:.|:|:|:.|.|::.|:|.|:||||.|.|::.. .
Mosquito   234 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ-A 297

  Fly   443 LELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPH 481
            ::.|.|....|..|:            ..||||||.:.|
Mosquito   298 IKELNEQEKQAQAQK------------AAAAAAAAAALH 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 23/55 (42%)
LOC1272724XP_311623.3 None

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