DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and Arx

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001292869.1 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:568 Identity:149/568 - (26%)
Similarity:210/568 - (36%) Gaps:164/568 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ILAGAAAASAAAAAAAAALAAASSGGGRG--------SPTDSEREQSLVAQHHHHHQQQQQHHHH 120
            :|.|||||:|||||||||..|..:.|.||        :....||:.|..|               
Mouse    96 LLQGAAAAAAAAAAAAAAATATGTAGPRGEVPPPPPPAARPGERQDSAGA--------------- 145

  Fly   121 QQQQQQQQHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSPPGNNPYAHHPMPPHLLAHF 185
                .......||.....:.|...:...|.:.       |||..:|       ..|.||.|....
Mouse   146 ----VAAAAAAAAWDTLKISQAPQVSISRSKS-------YRENGAP-------FVPPPPALDELS 192

  Fly   186 PPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGH-----GLTGDPAQHLSHLSHLSHQ 245
            .|...|               ||      .|||.|....|.     |.||             .:
Mouse   193 GPGGVA---------------HP------EERLSAASGPGSAPAAGGGTG-------------AE 223

  Fly   246 QHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSS 310
            .....|.....||.....|:         .:::.......|..........:.|.:..::..:::
Mouse   224 DDEEELLEDEEDEEEEEELL---------EDDDEELLEDDARALLKEPRRCSVATTGTVAAAAAA 279

  Fly   311 SNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLS 375
            :         ...:...|..:|..:...:...|::   ||  ||:||:  ..||..||...|   
Mouse   280 A---------AAAVATEGGELSPKEELLLHPEDAE---GK--DGEDSV--CLSAGSDSEEGL--- 325

  Fly   376 LSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTA 440
            |.:|||:.||.||.:||:.||::|::..|..|..|.|||.:|:|::.:|:.|:||||.||:::..
Mouse   326 LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 390

  Fly   441 VGLEL----LAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAM 501
            .|.:.    |...|..:|...|    :|||.|.|:       .||   ..|:|..:..||||||.
Mouse   391 AGAQTHPPGLPFPGPLSATHPL----SPYLDASPF-------PPH---HPALDSAWTAAAAAAAA 441

  Fly   502 QKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAA-------------------- 546
            ..||||          ||    ||..:.||.||...||.:..||.                    
Mouse   442 AFPSLP----------PP----PGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAP 492

  Fly   547 AAAASAGAQQQQQQPPA---ASRSPATSQSANSEADCERTSSSSRQRL 591
            ..:||..|...:|..||   |..|.|.:..|.:.|| .|.||.:..||
Mouse   493 LTSASTAAALLRQPTPAVEGAVASGALADPATAAAD-RRASSIAALRL 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 24/51 (47%)
ArxNP_001292869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 40/228 (18%)
Homeobox 334..386 CDD:278475 24/51 (47%)
OAR 528..545 CDD:281777 6/13 (46%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 4/8 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I4548
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

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