DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and dbx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_002940015.1 Gene:dbx1 / 100495433 XenbaseID:XB-GENE-480177 Length:328 Species:Xenopus tropicalis


Alignment Length:252 Identity:63/252 - (25%)
Similarity:87/252 - (34%) Gaps:95/252 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 LSLSKKQRKA---RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKW 435
            |:...|.|:.   |..|:|.|.:.|||.|::|||:|..||.:||.||.|.|.|||.|:||||.||
 Frog   163 LAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAGKLGLKDSQVKIWFQNRRMKW 227

  Fly   436 KRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAA 500
            :....  .|||:..|                                                  
 Frog   228 RNSKE--RELLSSGG-------------------------------------------------- 240

  Fly   501 MQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAASAGAQQQQQQPPAAS 565
            .::.:||..:.               |.|.........||               :.:::|  ..
 Frog   241 CREQTLPTKFN---------------PHPDLSDVGKKSSG---------------EGEEEP--MC 273

  Fly   566 RSPATSQSANSEADCERTSSSSRQRLITPSPPLNP--GSPPHRERINEEEDRERDEE 620
            .|||.|    |...|...|.....:|  |..|.|.  .|.|.....:|||:.|::||
 Frog   274 NSPAHS----SPYQCPEHSLRLDAQL--PPSPFNSSIASKPSDFSDSEEEEGEQEEE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 31/58 (53%)
dbx1XP_002940015.1 Homeodomain 175..229 CDD:459649 30/53 (57%)

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