DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and barhl2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_012817899.1 Gene:barhl2 / 100493839 XenbaseID:XB-GENE-482777 Length:359 Species:Xenopus tropicalis


Alignment Length:512 Identity:149/512 - (29%)
Similarity:186/512 - (36%) Gaps:201/512 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SRFMITDILAGAAAASAAAAAAAAALAAASSGGGRG--SPTDSERE-------------QSLVAQ 106
            |.|.|..||:.|.|.|....:.....|.|:...|:|  || |||.:             ...|.|
 Frog     4 SSFGIDTILSNAGAVSPGMLSGDFRDARATDFRGQGPLSP-DSEIDTVGSSPSSPISVTMEPVDQ 67

  Fly   107 HH-----HHHQQQQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSP 166
            |.     ||..|..||.|..|||..||.|                                   |
 Frog    68 HRLVDSVHHSAQHLQHLHPTQQQSPQQQQ-----------------------------------P 97

  Fly   167 P--GNNPYAHHP--MPPHLLAHFPP----AHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHR 223
            |  |:.|.....  :...:|....|    |.|:...           |.|||..          :
 Frog    98 PQLGSAPRTSTSSFLIKDILGDSKPLAACAPYSTTV-----------PSPHHTP----------K 141

  Fly   224 H-GHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSAS 287
            | |:|               |.:...|.|...|.|.:.::..:.:.|..:               
 Frog   142 HEGNG---------------SSESFRPKLEQEMQDGKGKAEKIREDLHTD--------------- 176

  Fly   288 NNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDD 352
                                                :.|.|:...||:..|              
 Frog   177 ------------------------------------IKGHGTKEEGDREIT-------------- 191

  Fly   353 DGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKL 417
                           ||.......:||.|||||||:||||..||:||||||||||||||:||..|
 Frog   192 ---------------SSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAAL 241

  Fly   418 ELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPY------LSAWPYAAAAA 476
            .|:|.||||||||||||||||||||||||||||||:|.||::  .:||      ||:.....|||
 Frog   242 NLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMF--PSPYFYHPSLLSSMDSTTAAA 304

  Fly   477 AQSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPG 533
            |     |......:|....|....:|:|.:|   |:....:.||    |.||..|.|
 Frog   305 A-----AAAMYSSMYRTPPAPHPQLQRPLVP---RVLIHGLGPG----GQPALNPLG 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 45/55 (82%)
barhl2XP_012817899.1 Homeodomain 205..261 CDD:459649 45/55 (82%)

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