DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and LOC100485697

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_002939439.1 Gene:LOC100485697 / 100485697 XenbaseID:XB-GENE-29077951 Length:266 Species:Xenopus tropicalis


Alignment Length:144 Identity:50/144 - (34%)
Similarity:69/144 - (47%) Gaps:18/144 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 PGS-SISGDQASTIDDSDSDDCGGKDDDG---------DDSMKNGSSAN-----GDSSSHLSLSL 376
            ||: :.|||..|..|:..:.|..|.:.|.         ..|..|.|:|.     .:...|.....
 Frog    53 PGTYTNSGDLPSYQDNIRNTDWYGGNQDMHYPPFSRIITPSGFNVSTAGCLGYLTEGPKHSLYLQ 117

  Fly   377 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAV 441
            ...:||.|..|:..|:..|||.||.||||:..:|.:||..:.|:..|||.|:||.|.|.||| |.
 Frog   118 HTSKRKRRVLFSQAQVYELEKRFEHQKYLTAPEREQLAKHIHLTPNQVKIWFQNHRYKMKRQ-AR 181

  Fly   442 GLELLA--EAGNYA 453
            ..:.||  ||.:|:
 Frog   182 NHDPLAEEEAKSYS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
LOC100485697XP_002939439.1 Homeodomain 122..178 CDD:459649 26/55 (47%)

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