Protein Alignment B-H2 and nkx3-3

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: XP_002937227.1
• Gene: nkx3-3 / 100485176
• XenbaseID: XB-GENE-479908
• Length: 241
• Species: Xenopus tropicalis
• Alignment Length: 241
• Identity: 58/241 - (24%)
• Similarity: 96/241 - (39%)
• Gaps: 59/241 - (24%)

  Fly   272 NGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQA 336
            ||||..|..|..::......:..:|...:|....|::.....:|             ..::.::.
 Frog    26 NGGNEGNGGNGDNTGKAKRTDEKSSTPPHSPSAEGHNDWPQADN-------------PPLTPEKE 77

  Fly   337 STIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFER 401
            .|..||.::|...:    .::...|:..:..|...|..|....::::|.||:..|:..||:.|..
 Frog    78 KTDTDSGTEDSTWE----PEAASTGAYTDPSSGDLLGDSPKSSKKRSRAAFSHAQVYELERRFSL 138

  Fly   402 QKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKR-----QTA----------VGLELLAEAGN 451
            |:|||..:|.:||..|:|::.|||.|:||||.|.||     |||          |.:.:|.:...
 Frog   139 QRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRKLIATQTAPKSSLAPARKVAVRVLVKDDQ 203

  Fly   452 ----------------YAAFQRLYGGATPYLSAWPYAAAAAAQSPH 481
                            |.|:|           .:||.....|..||
 Frog   204 RQYCPEDILNPSLLSLYHAYQ-----------YYPYMYCLPAWVPH 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	25/55 (45%)
nkx3-3	XP_002937227.1	Homeodomain	118..174	CDD:459649	25/55 (45%)