Protein Alignment B-H2 and Hoxb2

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 245
• Identity: 70/245 - (28%)
• Similarity: 98/245 - (40%)
• Gaps: 61/245 - (24%)

  Fly   327 PGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQ 391
            |..:.|..:||.:         |...||....::|.|.:               |:.|||:|:.|
  Rat   113 PSPAASSVRASGV---------GSPSDGPGLPESGGSGS---------------RRLRTAYTNTQ 153

  Fly   392 LQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQT---------AVGLELLA 447
            |..|||.|...|||....|:|:|..|:|::.|||.|:||||.|.||||         ..||....
  Rat   154 LLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPDGEPGGLSAQD 218

  Fly   448 EAGNYAAFQRLYGG--ATPYLSAWPYAAAAAAQSPHGATP-----SAIDIYYRQAAA-----AAA 500
            :||..|....:..|  |:..|....:..|.|||.|.||.|     :|::.....:..     |..
  Rat   219 DAGEPAEEPTVSPGDVASHRLREACFLPAEAAQGPRGAPPPLPPATALESVGASSPGCTMLRAGG 283

  Fly   501 MQKPSLPASYRMYQSSIPPGMSLPGMP----------APPPPGAAPMLSG 540
            :|...||      :.:.|.....|.:|          .|...|.:|.|.|
  Rat   284 LQSEPLP------EDACPERQDSPFLPDLNFFAADSCLPMSGGLSPSLQG 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	28/55 (51%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	28/55 (51%)