DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and meox2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001116898.1 Gene:meox2 / 100144655 XenbaseID:XB-GENE-852818 Length:300 Species:Xenopus tropicalis


Alignment Length:281 Identity:77/281 - (27%)
Similarity:114/281 - (40%) Gaps:70/281 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PHPHHLQLERERLEALHRHGHG----------------LTGDP-------AQHLSHLSHLSHQQH 247
            ||.....|......:|..||..                |||.|       :||     |..|..|
 Frog    12 PHATSQGLHPFAQSSLALHGRSDHMSYPDLSSSSSSCILTGYPNEEGMFGSQH-----HRGHHHH 71

  Fly   248 HPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNN------NNNNSASANSNIISG 306
            |.|.||  |.::....|.        .|.:....:|..||..::      :.....|.:.:|:..
 Frog    72 HHHHHH--HQQQQHQTLQ--------SNWHIPQMSSPPASTRHSLCLQQESGPPDLSGSPSILCS 126

  Fly   307 NSSSSNNNNGSGNGNMLLGGPGSSISGDQA-STIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSS 370
            |:||...|:.:|         .:.::||.. .|:..::::...||        :...|::....|
 Frog   127 NTSSLGTNSSTG---------AACVTGDYGRQTLSPAEAEKRTGK--------RKSDSSDSQEGS 174

  Fly   371 HLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKW 435
            :.| .::.|.||.|||||..|::.||..|....||:...|.|:|..|:|::.|||.|:||||.||
 Frog   175 YKS-DVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKW 238

  Fly   436 KR-----QTAVGLELLAEAGN 451
            ||     |.|...|  .|.||
 Frog   239 KRVKGGQQGAAARE--KELGN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 28/55 (51%)
meox2NP_001116898.1 Homeodomain 184..240 CDD:459649 28/55 (51%)

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