DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5445 and nbr1

DIOPT Version :9

Sequence 1:NP_001285371.1 Gene:CG5445 / 32722 FlyBaseID:FBgn0030838 Length:303 Species:Drosophila melanogaster
Sequence 2:XP_004918693.1 Gene:nbr1 / 100485564 XenbaseID:XB-GENE-949692 Length:950 Species:Xenopus tropicalis


Alignment Length:96 Identity:22/96 - (22%)
Similarity:41/96 - (42%) Gaps:22/96 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PSMKIVQEKQVNAQQQAFQLQNDGTERWPNNCYLT--------SPIQTQRINVPALRPGE----T 230
            |..|.::.         ::::|:|..:|..:..||        :|...:...||:|.|.|    :
 Frog   374 PGTKFIKH---------WRMKNNGNVKWSLDTKLTFMWGNLTLAPPSCKEAPVPSLHPNEVGVLS 429

  Fly   231 CDILADMMPTQPPTMWRLCTSNGWYFGDAIW 261
            .|.:|..:.....:.||| :..|.:||..:|
 Frog   430 VDFIAPALEGTYTSHWRL-SHKGEHFGPRVW 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5445NP_001285371.1 UBA_CF106 129..170 CDD:270534
NBR1_like <197..261 CDD:304553 19/75 (25%)
nbr1XP_004918693.1 PB1_NBR1 5..85 CDD:99718
ZZ_NBR1_like 278..321 CDD:239080
N_BRCA1_IG 365..464 CDD:406545 22/96 (23%)
UBA_NBR1 900..938 CDD:270504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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