DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5445 and nbr1

DIOPT Version :10

Sequence 1:NP_573213.1 Gene:CG5445 / 32722 FlyBaseID:FBgn0030838 Length:303 Species:Drosophila melanogaster
Sequence 2:XP_004918693.1 Gene:nbr1 / 100485564 XenbaseID:XB-GENE-949692 Length:950 Species:Xenopus tropicalis


Alignment Length:96 Identity:22/96 - (22%)
Similarity:41/96 - (42%) Gaps:22/96 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PSMKIVQEKQVNAQQQAFQLQNDGTERWPNNCYLT--------SPIQTQRINVPALRPGE----T 230
            |..|.::.         ::::|:|..:|..:..||        :|...:...||:|.|.|    :
 Frog   374 PGTKFIKH---------WRMKNNGNVKWSLDTKLTFMWGNLTLAPPSCKEAPVPSLHPNEVGVLS 429

  Fly   231 CDILADMMPTQPPTMWRLCTSNGWYFGDAIW 261
            .|.:|..:.....:.||| :..|.:||..:|
 Frog   430 VDFIAPALEGTYTSHWRL-SHKGEHFGPRVW 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5445NP_573213.1 UBA_CF106 129..170 CDD:270534
NBR1_like 197..261 CDD:473955 19/75 (25%)
nbr1XP_004918693.1 PB1_NBR1 5..85 CDD:99718
ZZ_NBR1_like 278..321 CDD:239080
NBR1_like 355..465 CDD:271343 22/96 (23%)
UBA_NBR1 900..938 CDD:270504
Blue background indicates that the domain is not in the aligned region.

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