DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and SAC6

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_010414.3 Gene:SAC6 / 851707 SGDID:S000002536 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:637 Identity:247/637 - (38%)
Similarity:375/637 - (58%) Gaps:44/637 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TVQEF------------KQNLEELIPNLDANKDGFIDLHELKDALNQVGFKLAGYQVREMIDEYK 64
            |:::|            ||...|.:     :|||.....|.::.|..||...:|   |..:|:|.
Yeast    21 TIEKFRAIDLDDKGWVEKQQALEAV-----SKDGDATYDEARETLKHVGVDASG---RVELDDYV 77

  Fly    65 GKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVVSKKENLETLGGMSSI----SSEGTTHSVR 125
            |......:.|..........:...|..:.||..|.:..|..    |..:.|    |..||||::.
Yeast    78 GLVAKLRESKTGAAPQTTFNVAPNSTPIVSTAATGLQHKGK----GTQAKIIVAGSQTGTTHTIN 138

  Fly   126 LEEQLAFSDWINSNLGHDKDLQHLLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAIN--- 187
            .||:..|:..|||.|..|:|:..|||..::..:|:...:||::|.|:||.|.|||||.|.:|   
Yeast   139 EEERREFTKHINSVLAGDQDIGDLLPFPTDTFQLFDECRDGLVLSKLINDSVPDTIDTRVLNWPK 203

  Fly   188 -KKNLTVYREFENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSC 251
             .|.|..::..||..:.:.|::||||.:||:.:.|:.:|:.||:|||:|||||.||.|.|.:...
Yeast   204 KGKELNNFQASENANIVINSAKAIGCVVVNVHSEDIIEGREHLILGLIWQIIRRGLLSKIDIKLH 268

  Fly   252 PGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGN 316
            |.|..||.|:|.||..:::.||.|||||.|:||::|..:||.|||..|:.|.|.|:.||.|:  :
Yeast   269 PELYRLLEDDETLEQFLRLPPEQILLRWFNYHLKQANWNRRVTNFSKDVSDGENYTILLNQL--D 331

  Fly   317 DADVNLDALRESDLQSRAEIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPE 381
            .|..:...|:.:||..|||.:||.|.||:||.:|||..:|.|..||||||||:|||.||||: |.
Yeast   332 PALCSKAPLQTTDLMERAEQVLQNAEKLDCRKYLTPSSLVAGNPKLNLAFVAHLFNTHPGLE-PI 395

  Fly   382 QIEGLESIEE-----TREEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRV 441
            |.|....|||     .||.:.:..|:||:.|.|.|..|:.||.|||::.|.::.:.||.|::..|
Yeast   396 QEEEKPEIEEFDAEGEREARVFTLWLNSLDVDPPVISLFDDLKDGLILLQAYEKVMPGAVDFKHV 460

  Fly   442 HKR---FSPLRKFMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSI 503
            :||   .:.:.:| :.|||.|||||||:...||||||.|.|:.|||..|||.|:|||||......
Yeast   461 NKRPASGAEISRF-KALENTNYAVDLGRAKGFSLVGIEGSDIVDGNKLLTLGLVWQLMRRNISIT 524

  Fly   504 LSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVR 568
            :..|:::|..:.:.:|::|..:::::.||.|.:|:|.|.|:::...::|:::.|..|.::|:||.
Yeast   525 MKTLSSSGRDMSDSQILKWAQDQVTKGGKNSTIRSFKDQALSNAHFLLDVLNGIAPGYVDYDLVT 589

  Fly   569 TSGTQEDNLANAKYAISMARKIGARVYALPEDITEVKPKMVMTVFACMMALD 620
            ...|:|:..|||:.|||:|||:||.::.:||||.||:.::::|..|.:|.|:
Yeast   590 PGNTEEERYANARLAISIARKLGALIWLVPEDINEVRARLIITFIASLMTLN 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 13/56 (23%)
EFh 27..80 CDD:298682 13/52 (25%)
CH 127..237 CDD:278723 46/113 (41%)
CH 271..370 CDD:278723 50/98 (51%)
CH 396..497 CDD:214479 48/103 (47%)
CH 517..619 CDD:214479 37/101 (37%)
SAC6NP_010414.3 SAC6 1..640 CDD:227401 246/634 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344903
Domainoid 1 1.000 102 1.000 Domainoid score I1530
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80174
Inparanoid 1 1.050 425 1.000 Inparanoid score I282
Isobase 1 0.950 - 0 Normalized mean entropy S1063
OMA 1 1.010 - - QHG54335
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - oto99184
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - LDO PTHR19961
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2112
SonicParanoid 1 1.000 - - X500
TreeFam 1 0.960 - -
1615.740

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