DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and SAC6

DIOPT Version :10

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_010414.3 Gene:SAC6 / 851707 SGDID:S000002536 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:637 Identity:247/637 - (38%)
Similarity:375/637 - (58%) Gaps:44/637 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TVQEF------------KQNLEELIPNLDANKDGFIDLHELKDALNQVGFKLAGYQVREMIDEYK 64
            |:::|            ||...|.:     :|||.....|.::.|..||...:|   |..:|:|.
Yeast    21 TIEKFRAIDLDDKGWVEKQQALEAV-----SKDGDATYDEARETLKHVGVDASG---RVELDDYV 77

  Fly    65 GKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVVSKKENLETLGGMSSI----SSEGTTHSVR 125
            |......:.|..........:...|..:.||..|.:..|..    |..:.|    |..||||::.
Yeast    78 GLVAKLRESKTGAAPQTTFNVAPNSTPIVSTAATGLQHKGK----GTQAKIIVAGSQTGTTHTIN 138

  Fly   126 LEEQLAFSDWINSNLGHDKDLQHLLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAIN--- 187
            .||:..|:..|||.|..|:|:..|||..::..:|:...:||::|.|:||.|.|||||.|.:|   
Yeast   139 EEERREFTKHINSVLAGDQDIGDLLPFPTDTFQLFDECRDGLVLSKLINDSVPDTIDTRVLNWPK 203

  Fly   188 -KKNLTVYREFENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSC 251
             .|.|..::..||..:.:.|::||||.:||:.:.|:.:|:.||:|||:|||||.||.|.|.:...
Yeast   204 KGKELNNFQASENANIVINSAKAIGCVVVNVHSEDIIEGREHLILGLIWQIIRRGLLSKIDIKLH 268

  Fly   252 PGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGN 316
            |.|..||.|:|.||..:::.||.|||||.|:||::|..:||.|||..|:.|.|.|:.||.|:  :
Yeast   269 PELYRLLEDDETLEQFLRLPPEQILLRWFNYHLKQANWNRRVTNFSKDVSDGENYTILLNQL--D 331

  Fly   317 DADVNLDALRESDLQSRAEIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPE 381
            .|..:...|:.:||..|||.:||.|.||:||.:|||..:|.|..||||||||:|||.||||: |.
Yeast   332 PALCSKAPLQTTDLMERAEQVLQNAEKLDCRKYLTPSSLVAGNPKLNLAFVAHLFNTHPGLE-PI 395

  Fly   382 QIEGLESIEE-----TREEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRV 441
            |.|....|||     .||.:.:..|:||:.|.|.|..|:.||.|||::.|.::.:.||.|::..|
Yeast   396 QEEEKPEIEEFDAEGEREARVFTLWLNSLDVDPPVISLFDDLKDGLILLQAYEKVMPGAVDFKHV 460

  Fly   442 HKR---FSPLRKFMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSI 503
            :||   .:.:.:| :.|||.|||||||:...||||||.|.|:.|||..|||.|:|||||......
Yeast   461 NKRPASGAEISRF-KALENTNYAVDLGRAKGFSLVGIEGSDIVDGNKLLTLGLVWQLMRRNISIT 524

  Fly   504 LSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVR 568
            :..|:::|..:.:.:|::|..:::::.||.|.:|:|.|.|:::...::|:::.|..|.::|:||.
Yeast   525 MKTLSSSGRDMSDSQILKWAQDQVTKGGKNSTIRSFKDQALSNAHFLLDVLNGIAPGYVDYDLVT 589

  Fly   569 TSGTQEDNLANAKYAISMARKIGARVYALPEDITEVKPKMVMTVFACMMALD 620
            ...|:|:..|||:.|||:|||:||.::.:||||.||:.::::|..|.:|.|:
Yeast   590 PGNTEEERYANARLAISIARKLGALIWLVPEDINEVRARLIITFIASLMTLN 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EFh 27..80 CDD:415501 13/52 (25%)
CH_PLS_rpt1 104..248 CDD:409141 61/151 (40%)
CH_PLS_rpt2 260..372 CDD:409144 55/111 (50%)
CH_PLS_rpt3 389..504 CDD:409147 55/122 (45%)
CH_PLS_rpt4 514..620 CDD:409150 37/105 (35%)
SAC6NP_010414.3 SAC6 1..640 CDD:227401 246/634 (39%)

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