DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and FIM5

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_198420.1 Gene:FIM5 / 833544 AraportID:AT5G35700 Length:687 Species:Arabidopsis thaliana


Alignment Length:635 Identity:234/635 - (36%)
Similarity:367/635 - (57%) Gaps:42/635 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IDLHELKDALNQVGFKLAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLDLKSKDVAS----- 94
            ::|..||........:|..:.|.::...:  ::|.||.|.::.:|.::: || ||...|.     
plant    21 VELRTLKSKFVSNKTQLGRFTVGDLPPVF--EKLKAFNGTIDEDEIKSV-LD-KSYPNADDEVDF 81

  Fly    95 -----TFKTVVSKKENLETLGGMSSISS---EGTT---HSVRLEEQLAFSDWINSNLGHDKDLQH 148
                 .|.:|.::  .:|..||....||   ..||   |::...|:.::...:|:.|..|..|:.
plant    82 EFFLRAFLSVQAR--GVEKSGGSKGASSFLKTSTTTVHHAINESEKASYVSHVNNYLRDDPFLKS 144

  Fly   149 LLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAIN-KKNLTVYREFENLTLALVSSQAIGC 212
            .||||......:..:|||:||||:||.:.|.|||||||| ||.|..:...|||||.|.|::||||
plant   145 YLPIDPATNAFFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIGC 209

  Fly   213 NIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAGLLFDNERLEDLMKMSPEAILL 277
            .:|||...|:|:|:|:|||||:.|||:|.:.:.:.....|.|..|:.|.:..|:||.::||.:||
plant   210 TVVNIGTQDIAEGRPYLVLGLISQIIKIQMLADLNFKKTPSLFQLVDDTQDAEELMGLAPEKVLL 274

  Fly   278 RWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQAA 342
            :|:|.||::||..::.|||.||:.|.|.|::||..:|...:  ...||...|...||:.:|:||.
plant   275 KWMNFHLKKAGYEKQVTNFSSDLKDGEAYAYLLNALAPEHS--THVALETKDPTERAKKVLEQAE 337

  Fly   343 KLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGL----DKPEQIEGL-ESIEETREEKTYRNWM 402
            ||:|:.:|:|:|:|:|...|||||||.:|.:..||    .|....|.: :.:|.:|||:.:|.|:
plant   338 KLDCKRYLSPKDIVDGSANLNLAFVAQIFQHRNGLTVDDSKTSFAEMMTDDVETSREERCFRLWI 402

  Fly   403 NSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRKFMEKLENCNYAVDLGKQ 467
            ||:|.|.:||.::.||.:|.|:.::.|.:.||.|||...:|  .|::...:|:||||..:.:||:
plant   403 NSLGTATYVNNVFEDLRNGWVLLEVLDKVSPGSVNWKHANK--PPIKMPFKKVENCNEVIKIGKE 465

  Fly   468 LKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLA--NTGNPIIEKEIVQWVNNRLSEA 530
            |:||||.:||.|:..||..|.||.:|||||...|.:|..|.  :.|..|.:.:|:.|.|.::...
plant   466 LRFSLVNVAGNDIVQGNKKLLLAFLWQLMRYTMLQLLRNLRSHSQGKEITDADILNWANRKVKRG 530

  Fly   531 GKQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVY 595
            |:.||..:|.|..::.|...::|:.|::...:|:.||....|:||...||.|.||:|||:|..::
plant   531 GRTSQADSFRDKNLSSGMFFLELLSAVEPRVVNWSLVTNGETEEDKKLNATYIISVARKLGCSIF 595

  Fly   596 ALPEDITEVKPKMVMTVFACMM--------ALDYVPNMDSVDQNNHNSSA 637
            .|||||.||..||::.:.|.:|        ..:...:.|:.|..:.||.|
plant   596 LLPEDIIEVNQKMMLILAASIMYWSLQQQSDTESTVSEDATDDGDANSVA 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 10/48 (21%)
EFh 27..80 CDD:298682 9/44 (20%)
CH 127..237 CDD:278723 53/110 (48%)
CH 271..370 CDD:278723 44/98 (45%)
CH 396..497 CDD:214479 43/100 (43%)
CH 517..619 CDD:214479 37/109 (34%)
FIM5NP_198420.1 CH_AtFIM_like_rpt1 123..238 CDD:409142 56/114 (49%)
CH_AtFIM_like_rpt2 259..367 CDD:409145 47/109 (43%)
CH_AtFIM_like_rpt3 390..503 CDD:409148 50/114 (44%)
CH_AtFIM_like_rpt4 513..621 CDD:409151 38/107 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2057
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80174
Inparanoid 1 1.050 405 1.000 Inparanoid score I459
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D312506at2759
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - otm2525
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - O PTHR19961
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X500
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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