DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and FIM1

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001031726.1 Gene:FIM1 / 828777 AraportID:AT4G26700 Length:687 Species:Arabidopsis thaliana


Alignment Length:651 Identity:229/651 - (35%)
Similarity:363/651 - (55%) Gaps:79/651 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LAGYQVREMIDEYKGKQLTAFQ---------------GKLNLEEFEALCLDLKSKDVASTFK--- 97
            ::||....:.|.:...|.|..:               ||:.:|:...|...||:  :::|||   
plant     1 MSGYVGVVVSDPWLQSQFTQVELRTLNSKYVSVKNQNGKVTIEDLPPLFAKLKA--LSATFKEDE 63

  Fly    98 -------------TVVSKKENL-----------ETLGG----MSSISSEGTT---HSVRLEEQLA 131
                         |.||.:|.|           |..||    .||.....||   |::...|:..
plant    64 IKGMLGELGSDTSTDVSFEEFLKIYLNLLSKAAEKSGGHHKNSSSFLKACTTTLLHTIYQSEKGP 128

  Fly   132 FSDWINSNLGHDKDLQHLLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAIN-KKNLTVYR 195
            |...||..||.|..|:..||:|....:||..:|||:||||:||.:.|.|||||||| |:.|..:.
plant   129 FVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWE 193

  Fly   196 EFENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAGLLFD 260
            ..||.||.|.|::|:||::|||...|||:|:|||||||:.|:|:|.:.:.:.|...|.|..||.|
plant   194 RNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQVLADLNLKKTPQLVELLED 258

  Fly   261 NERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGNDAD-VNLDA 324
            ::.:|:|:::.||.:||:|:|.||::.|..:..:||.:|:.|::.|:.||..:|....| ..|||
plant   259 SDDVEELLRLPPEKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDA 323

  Fly   325 LRESDLQSRAEIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEG---- 385
               .|...|||::|..|.::||:.:||.:::|.|...|||||||.:|:...||:|    :|    
plant   324 ---KDPLERAELVLSHAERMNCKRYLTAEEIVEGSSTLNLAFVAQIFHERNGLNK----DGKYAF 381

  Fly   386 ----LESIEETREEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFS 446
                .|.:|..|:|:.||.|:||:|:..:||.::.|:.:|.::.::.|.:.|..|||....|  .
plant   382 AEMMTEDVETCRDERCYRLWINSLGIDSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASK--P 444

  Fly   447 PLRKFMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLAN-- 509
            |::....|:||||..:.:|||||||||.:||.|:..||..|.|.|:|||||.:.|.:|..|.:  
plant   445 PIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGLLWQLMRFHMLQLLKSLRSRT 509

  Fly   510 TGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVRTSGTQE 574
            .|..:.:.:|:.|.|.::...|::.|:.:|.|.:::.|...::|:.|::...:|:.||....|.:
plant   510 LGKEMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGETDD 574

  Fly   575 DNLANAKYAISMARKIGARVYALPEDITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANN 639
            :...||.|.:|:|||:|..|:.|||||.||..||::.:.|.:|..       |:.:::..||.::
plant   575 EKRLNATYIVSVARKLGCSVFLLPEDIVEVNQKMILILTASIMYW-------SLQRHSRESSDSS 632

  Fly   640 S 640
            |
plant   633 S 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 8/47 (17%)
EFh 27..80 CDD:298682 8/43 (19%)
CH 127..237 CDD:278723 56/110 (51%)
CH 271..370 CDD:278723 40/99 (40%)
CH 396..497 CDD:214479 42/100 (42%)
CH 517..619 CDD:214479 34/101 (34%)
FIM1NP_001031726.1 EFh 34..87 CDD:298682 14/54 (26%)
SAC6 62..617 CDD:227401 210/563 (37%)
CH 124..235 CDD:278723 56/110 (51%)
CH 269..366 CDD:278723 40/99 (40%)
CH 398..496 CDD:214479 43/99 (43%)
CH 518..619 CDD:214479 34/100 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2057
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 405 1.000 Inparanoid score I459
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D312506at2759
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - otm2525
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - LDO PTHR19961
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X500
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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