DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and AT2G04750

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_178552.1 Gene:AT2G04750 / 815018 AraportID:AT2G04750 Length:652 Species:Arabidopsis thaliana


Alignment Length:625 Identity:237/625 - (37%)
Similarity:374/625 - (59%) Gaps:36/625 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IDLHELKDALNQVGFKLAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLD----LKSKDVAST 95
            ::|..||........:.....|:.:...:  .:|..|.||.:..|.:.: ||    .::|:|  .
plant    21 VELRTLKSKFYSTKTRFGRVTVKHLPPVF--AKLKYFNGKFDENEIKTI-LDESYPNRAKEV--E 80

  Fly    96 FKTVVSKKENLETLG--GMSSISSEGTT---HSVRLEEQLAFSDWINSNLGHDKDLQHLLPIDSE 155
            |:|.:....::::.|  |.||.....||   ||:...|:.::...|||.|..:.:|:..|||:..
plant    81 FETFLRAFLSVQSRGSKGASSFLKTSTTTFHHSINESEKASYVSHINSYLKDEPNLKSYLPINPT 145

  Fly   156 GKRLYLSIKDGILLCKIINHSCPDTIDERAIN-KKNLTVYREFENLTLALVSSQAIGCNIVNIDA 219
            ...|:..:|||:||||:||.:.|.|||||||| ||.|..:...|||:|.|.|::||||.:|||..
plant   146 TNALFDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIGCTVVNIGT 210

  Fly   220 HDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAGLLFDNERLEDLMKMSPEAILLRWVNHHL 284
            .|:|:|.|||||||::|||:|.|.:.:.|...|.|..|:.:|:.:|:||.::||.:||:|:|.||
plant   211 QDIAEGTPHLVLGLIFQIIKIQLLADLNLKKTPQLVELVEENQDVEELMGLAPEKLLLKWMNFHL 275

  Fly   285 ERAGISRRCTNFQSDIVDSEIYSHLLKQIA-GNDADVNLDALRESDLQSRAEIMLQQAAKLNCRS 348
            ::||..::.|||.||:.|.|.|::||..:| .:..:|.|:.   .|...||..:|:||.||:|:.
plant   276 KKAGYEKQVTNFSSDVKDGEAYAYLLNALAPEHSTNVTLEI---KDPSERATKVLEQAEKLDCKR 337

  Fly   349 FLTPQDVVNGVYKLNLAFVANLFNNHPGL-DKPEQI-----EGLESIEET-REEKTYRNWMNSMG 406
            ||:|:|:|.|...|||||||.||::..|| |:..::     |.:...||| |||:.:|:||||:|
plant   338 FLSPKDIVEGSANLNLAFVAQLFHHRNGLSDESPKVPISVAEMVTEDEETSREERCFRHWMNSLG 402

  Fly   407 VAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRKFMEKLENCNYAVDLGKQLKFS 471
            ...:|:.::.|:.:|.|:.::.|.:.||.|||...:|  .|::...:|:||||..:.:||:|.||
plant   403 AVTYVDNVFEDVRNGWVLLEVLDKVSPGSVNWKHANK--PPIKMPFKKVENCNQVIKIGKELNFS 465

  Fly   472 LVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLAN--TGNPIIEKEIVQWVNNRLSEAGKQS 534
            ||.:||.|:..||..|.||.:|||||...|.||:.|.:  .|..|.|.:|:.|.|.::.::|:.|
plant   466 LVNVAGHDIMQGNKKLLLAFLWQLMRYTMLQILNNLRSHCQGKDITEADILNWANRKVKKSGRTS 530

  Fly   535 QLRNFNDPAIADGKIVIDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYALPE 599
            |..:|.|..:|:|...::|:.|::...:|:.||....|||:...||.|.||:|||:|..::.|||
plant   531 QAVSFKDKNLANGIFFLELLSAVEPRVVNWSLVSKGETQEEKNLNATYIISVARKLGCSIFLLPE 595

  Fly   600 DITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANN 639
            ||.||..:|::.:.|.:|      |.....|::..|:.::
plant   596 DILEVNQRMMLILAASIM------NWSLQQQSDTESTVSD 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 9/48 (19%)
EFh 27..80 CDD:298682 8/44 (18%)
CH 127..237 CDD:278723 54/110 (49%)
CH 271..370 CDD:278723 45/99 (45%)
CH 396..497 CDD:214479 41/100 (41%)
CH 517..619 CDD:214479 37/101 (37%)
AT2G04750NP_178552.1 SAC6 112..607 CDD:227401 211/499 (42%)
CH_AtFIM_like_rpt1 117..232 CDD:409142 57/114 (50%)
CH_AtFIM_like_rpt3 386..499 CDD:409148 50/114 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2057
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80174
Inparanoid 1 1.050 405 1.000 Inparanoid score I459
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D312506at2759
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - otm2525
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - O PTHR19961
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X500
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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