DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and PLS1

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001138791.1 Gene:PLS1 / 5357 HGNCID:9090 Length:629 Species:Homo sapiens


Alignment Length:621 Identity:323/621 - (52%)
Similarity:434/621 - (69%) Gaps:26/621 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QEFKQNLEELIPNLDANKDGFIDLHELKDALNQVGFKLAGYQVREMIDEYKGKQLTAFQGKLNLE 78
            :|..:.|:|....:|.:..|::..:||:|...:....|.||:|||::::......:...||::.|
Human    10 REELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSNKDGKISFE 74

  Fly    79 EFEALCLDLKSKDVASTFKTVVSKKENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHD 143
            ||.:|..:|||||::.||:.:::|:|.:..:||.|:||||||.||...||::||.:|||..|.:|
Human    75 EFVSLMQELKSKDISKTFRKIINKREGITAIGGTSTISSEGTQHSYSEEEKVAFVNWINKALEND 139

  Fly   144 KDLQHLLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENLTLALVSSQ 208
            .|.:||:|::.....|:.|:.|||||||:||.|.||||||||||||.||.:...|||.|||.|:.
Human   140 PDCKHLIPMNPNDDSLFKSLADGILLCKMINLSEPDTIDERAINKKKLTPFTISENLNLALNSAS 204

  Fly   209 AIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAGLLFDNERLEDLMKMSPE 273
            ||||.:|||.|.||.:||||||||||||||::|||:.|.:.....|..||.:.|.||:|||:|||
Human   205 AIGCTVVNIGASDLKEGKPHLVLGLLWQIIKVGLFADIEISRNEALIALLNEGEELEELMKLSPE 269

  Fly   274 AILLRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIA---GNDAD---VNLDALRESDLQS 332
            .:||||||:||..|| ....:||..||.||..|.|||.|||   |.|..   ::|..:.|::...
Human   270 ELLLRWVNYHLTNAG-WHTISNFSQDIKDSRAYFHLLNQIAPKGGEDGPAIAIDLSGINETNDLK 333

  Fly   333 RAEIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQ-------IEGLESIE 390
            ||.:|||:|.||.|:.|:||.|||:|..||||||||||||.:|.|.||..       :||     
Human   334 RAGLMLQEADKLGCKQFVTPADVVSGNPKLNLAFVANLFNTYPCLHKPNNNDIDMNLLEG----- 393

  Fly   391 ETREEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLFDVIK-PGIVNWSRVHK-RFSPLRKFME 453
            |::||:|:||||||:||.|::|.|||||||.||||||:::|: |  ||||.|:| .:..|...|:
Human   394 ESKEERTFRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVP--VNWSHVNKPPYPALGGNMK 456

  Fly   454 KLENCNYAVDLGK-QLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLANTGNPIIEK 517
            |:|||||||:||| :.|||||||||||||:||:||||||:|||||.|||::||.|.. |..:.::
Human   457 KIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRYTLNVLSDLGE-GEKVNDE 520

  Fly   518 EIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVRTSG-TQEDNLANAK 581
            .|::|||..|..|.|::.:.:|.|.:|:....|:||||||...::..|::|... :.||.|.|||
Human   521 IIIKWVNQTLKSANKKTSISSFKDKSISTSLPVLDLIDAIAPNAVRQEMIRRENLSDEDKLNNAK 585

  Fly   582 YAISMARKIGARVYALPEDITEVKPKMVMTVFACMM 617
            ||||:|||||||:||||:|:.|||||||||||||:|
Human   586 YAISVARKIGARIYALPDDLVEVKPKMVMTVFACLM 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 16/56 (29%)
EFh 27..80 CDD:298682 14/52 (27%)
CH 127..237 CDD:278723 67/109 (61%)
CH 271..370 CDD:278723 54/104 (52%)
CH 396..497 CDD:214479 69/103 (67%)
CH 517..619 CDD:214479 55/102 (54%)
PLS1NP_001138791.1 SAC6 13..621 CDD:227401 321/616 (52%)
Actin-binding 1 108..380 152/272 (56%)
Actin-binding 2 381..625 139/249 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152964
Domainoid 1 1.000 144 1.000 Domainoid score I4611
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 613 1.000 Inparanoid score I913
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D138895at33208
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - otm40640
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - LDO PTHR19961
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X500
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.770

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