DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and plst-1

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001294439.1 Gene:plst-1 / 3564941 WormBaseID:WBGene00022425 Length:370 Species:Caenorhabditis elegans


Alignment Length:354 Identity:218/354 - (61%)
Similarity:274/354 - (77%) Gaps:5/354 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 LRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQA 341
            :||||:||||||..||..||.|||||||||:|||.|||.|.:.|.|..|.......||..||.:|
 Worm     1 MRWVNYHLERAGTQRRLHNFTSDIVDSEIYTHLLHQIAPNGSGVTLSPLGVHGNVPRAGAMLDEA 65

  Fly   342 AKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIE-GL---ESIEETREEKTYRNWM 402
            .||:||.|:|..||..|.|||||||||||||.||.|..|...| |.   :.||||||||||||||
 Worm    66 EKLDCREFVTATDVAAGNYKLNLAFVANLFNKHPNLPDPGADEVGFSVEDVIEETREEKTYRNWM 130

  Fly   403 NSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRKFMEKLENCNYAVDLGKQ 467
            |||||.|:|||||:||.:|:|||||:|:|:||:|.|.||.:.|..||..|::::||||||:||||
 Worm   131 NSMGVDPYVNWLYADLQNGVVIFQLYDIIRPGMVTWKRVVRTFHKLRGMMDQIQNCNYAVELGKQ 195

  Fly   468 LKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLANTGNPI-IEKEIVQWVNNRLSEAG 531
            |:||||||.|:|:.|||.||||||:||||||||||:|::...:|:.: .:|:||.|||.:|..:|
 Worm   196 LRFSLVGIQGKDIYDGNQTLTLALVWQLMRAYTLSVLAQCTQSGDSLPADKDIVAWVNEKLKNSG 260

  Fly   532 KQSQLRNFNDPAIADGKIVIDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYA 596
            |.:.:|:|.||||:|||:|:|||||||...|::.||::..:.||.::||||||:..|||||::||
 Worm   261 KSTSIRSFQDPAISDGKVVLDLIDAIKPNVIDHSLVKSGKSNEDKMSNAKYAITCGRKIGAKIYA 325

  Fly   597 LPEDITEVKPKMVMTVFACMMALDYVPNM 625
            |||||.|||||||:|||||:||.||:|:|
 Worm   326 LPEDIVEVKPKMVLTVFACLMARDYLPDM 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234
EFh 27..80 CDD:298682
CH 127..237 CDD:278723
CH 271..370 CDD:278723 56/92 (61%)
CH 396..497 CDD:214479 69/100 (69%)
CH 517..619 CDD:214479 62/101 (61%)
plst-1NP_001294439.1 CH 1..94 CDD:278723 56/92 (61%)
CH 124..225 CDD:214479 69/100 (69%)
CH 246..348 CDD:214479 62/101 (61%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162658
Domainoid 1 1.000 169 1.000 Domainoid score I2299
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80174
Inparanoid 1 1.050 440 1.000 Inparanoid score I932
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D138895at33208
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - oto20172
orthoMCL 1 0.900 - - OOG6_101115
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X500
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.770

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