DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fim and Pls3

DIOPT Version :9

Sequence 1:NP_728074.1 Gene:Fim / 32721 FlyBaseID:FBgn0024238 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_006527794.1 Gene:Pls3 / 102866 MGIID:104807 Length:643 Species:Mus musculus


Alignment Length:648 Identity:341/648 - (52%)
Similarity:432/648 - (66%) Gaps:49/648 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LNVEQHQTVQEFKQNLEEL---IPNLDANKDGFIDLHELKDALNQVGFKLAGYQVRE-----MID 61
            |.:::..|.|..|..|:||   ...:|.|.:|||..:||.:...:....|.||:|||     |:|
Mouse     3 LYMDEMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMVD 67

  Fly    62 EYKGKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVVSKKENLETLGGMSSISSEGTTHSVRL 126
            ..:.|     .||::..||..:..::||.|:|.||:..:::||.:..|||.|.:|||||.||...
Mouse    68 GDRNK-----DGKISFNEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYSE 127

  Fly   127 EEQLAFSDWINSNLGHDKDLQHLLPIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNL 191
            ||:.||.:|||..|.:|.|.:|::|::.....|:.::.|||:|||:||.|.||||||||||||.|
Mouse   128 EEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKL 192

  Fly   192 TVYREFENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAG 256
            |.:...|||.|||.|:.||||::|||.|.||..||||||||||||||:||||:.|.|.....||.
Mouse   193 TPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAA 257

  Fly   257 LLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDI---------VDSEIYSHLLKQ 312
            ||.|.|.||:|||:|||.:||||.|.|||.:| .::..||.:||         .||:.|.|||.|
Mouse   258 LLRDGETLEELMKLSPEELLLRWANFHLENSG-WQKINNFSADIKLIDFSNSVKDSKAYFHLLNQ 321

  Fly   313 IAGND-------ADVNLDALRESDLQSRAEIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANL 370
            ||...       .|:|:....|:|...|||.|||||.||.||.|:||.|||:|..||||||||||
Mouse   322 IAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL 386

  Fly   371 FNNHPGLDKPEQ-------IEGLESIEETREEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLF 428
            ||.:|.|.|||.       :||     |||||:|:||||||:||.||||.||:||.|.|||.||:
Mouse   387 FNKYPALTKPENQDIDWTLLEG-----ETREERTFRNWMNSLGVNPHVNHLYADLQDALVILQLY 446

  Fly   429 DVIK-PGIVNWSRVHK-RFSPLRKFMEKLENCNYAVDLGKQ-LKFSLVGIAGQDLNDGNATLTLA 490
            :.|| |  |:||:|:| .:..|...|:|||||||||:|||. .|||||||.||||||||.|||||
Mouse   447 ERIKVP--VDWSKVNKPPYPKLGANMKKLENCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLA 509

  Fly   491 LIWQLMRAYTLSILSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIVIDLID 555
            ::|||||.|||::|..|.. |....:..||.|||..||||||.:.:::|.|..|:....|:||||
Mouse   510 VVWQLMRRYTLNVLEDLGE-GQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLID 573

  Fly   556 AIKEGSINYELVRTSG-TQEDNLANAKYAISMARKIGARVYALPEDITEVKPKMVMTVFACMM 617
            ||:.|.|||:||::.. |::|...|||||:||||:|||||||||||:.|||||||||||||:|
Mouse   574 AIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLM 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FimNP_728074.1 EF-hand_7 27..84 CDD:290234 20/61 (33%)
EFh 27..80 CDD:298682 18/57 (32%)
CH 127..237 CDD:278723 64/109 (59%)
CH 271..370 CDD:278723 56/114 (49%)
CH 396..497 CDD:214479 68/103 (66%)
CH 517..619 CDD:214479 63/102 (62%)
Pls3XP_006527794.1 EFh 20..86 CDD:238008 22/70 (31%)
SAC6 110..636 CDD:227401 305/534 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843049
Domainoid 1 1.000 146 1.000 Domainoid score I4517
eggNOG 1 0.900 - - E2759_KOG0046
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 611 1.000 Inparanoid score I913
Isobase 1 0.950 - 0 Normalized mean entropy S1063
OMA 1 1.010 - - QHG54335
OrthoDB 1 1.010 - - D138895at33208
OrthoFinder 1 1.000 - - FOG0000930
OrthoInspector 1 1.000 - - otm42714
orthoMCL 1 0.900 - - OOG6_101115
Panther 1 1.100 - - O PTHR19961
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2112
SonicParanoid 1 1.000 - - X500
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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