DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment f and Espn

DIOPT Version :10

Sequence 1:NP_001036284.1 Gene:f / 32718 FlyBaseID:FBgn0262111 Length:1918 Species:Drosophila melanogaster
Sequence 2:XP_038966608.1 Gene:Espn / 56227 RGDID:620652 Length:887 Species:Rattus norvegicus


Alignment Length:1554 Identity:283/1554 - (18%)
Similarity:437/1554 - (28%) Gaps:757/1554 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 GGMGQVGQMYHPGSVSGSERPNGGALALHYAAARGCLDCVQLLVAASVDICYFSTINVKKGLLGR 413
            |.:..:..::..|.:..|.|....||.:|:||..|.|.|::.||.   ::...:....:.|....
  Rat    13 GDLDVLRSLHAAGLLGPSLRDPLDALPVHHAARSGKLHCLRYLVE---EVALPAVSRARNGATPA 74

  Fly   414 MTTSLTSYR------------RSKQKSKSNNDIHTIIA----TEVVTAAILSSSVHSSSTGSEIG 462
            ...:.|.|.            |.::|..|...:..:.|    .:||...:.....:|:.|    .
  Rat    75 HDAAATGYLSCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVNWLLYQGGANSAIT----T 135

  Fly   463 DGGQGNTSLIEEAAAQDQSSEEQDRQHQHAKDPLAQTEMNHHPHSHHQRKSAVEVVRQQMDDDGD 527
            |.|   ...|..|||:...             |..:..:.|:|                      
  Rat   136 DTG---ALPIHYAAAKGDL-------------PSMKLLVGHYP---------------------- 162

  Fly   528 QDSNDDDETMPMMSGVGRKEQNNRRSVVSANTQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLY 592
                         .||              |.|.:|..||:|||.|||||||.|:||.|.....:
  Rat   163 -------------EGV--------------NAQTNNGATPLYLACQEGHLEVTKYLVQECSADPH 200

  Fly   593 VRARDGMAPIHAASQMGCLDCLKWMVQDQGVDPNLRDGDGATPLHFAASRGHLSVVRWLLNHGAK 657
            :||:|||.|:|||:|||....|.|:|....|..:.:|.||||.:||||||||..|:.|||.|||:
  Rat   201 LRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAE 265

  Fly   658 LSLDKYGKSPINDAAENQQVECLNVLVQHGTSV--------------DYNGKSSSQRH-KSQQQL 707
            :|.|.:|.:|::|||||.::||..:|..:|..:              |:||.:...|: ::.|.|
  Rat   266 ISQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLADFNGHTHCSRYLRTVQTL 330

  Fly   708 HQQHQQQQQQQQQQHLSSSCNSNSNSSKQTSRSNTIKSKSSSTLSSDVEPFYLHPPALAGGSGGS 772
            ..:|:...:..... |.:....:..||..|:.|                   :.||....||..|
  Rat   331 SLEHRVLSRDPSMD-LEAKQPDSGMSSPNTTMS-------------------VQPPNFDLGSPTS 375

  Fly   773 GMGLGMGMGMGMGMSMGLGISRKNSDALYSQQSRSSSEKLYNGSSSLGGNPGGNSSSGGGGVG-- 835
                                      .|.:..|.|||.....|..|..|.||..||.....:.  
  Rat   376 --------------------------TLSNYDSCSSSHSSSKGQRSTRGVPGARSSDLQSYMDML 414

  Fly   836 -----GGGGSGGAL----------LPNDGLYVNPMRNGGMYNTPSPNGSISGESFFLHDPQDIIY 885
                 ...|...:|          .|..|..:.|...|    .|:||..:.     ||  .|.||
  Rat   415 NPEPRSKQGKPSSLPPPPPPSFPPPPPPGTQLPPPPPG----YPAPNPPVG-----LH--LDNIY 468

  Fly   886 ----NRVRDLFVDSDCSSSVKQHGKSHAHQLLQSKAGNAMTIQADVHSSSSGAGSGSDESVSISS 946
                |::|.:.||     |:|:..|: .|                                    
  Rat   469 MQTKNKLRHVEVD-----SLKKESKA-CH------------------------------------ 491

  Fly   947 SFNSPKQQQQLRSQSFNRHGSSSNISASGNIKNNNYKAHKGKPSNQNGGGDHDYEDIYLVREESR 1011
                ||.:                       .|:.:    .:||:.:|......:|..|:|::| 
  Rat   492 ----PKVE-----------------------PNDQF----AQPSSGDGYSGLRRQDSGLLRQDS- 524

  Fly  1012 KQHQQQQQHQLQQQQQLQHQATQQQQQQQQQQQQLQHKYNVGRSRSRDSGSHSRSASASSTRSTD 1076
                         :..|:|....::|...::|:..        |:...:|.:.|....|      
  Rat   525 -------------ELLLRHNTGLRRQDSDRKQRSF--------SKQPSTGDYYRQLGRS------ 562

  Fly  1077 IVLQYSNHHLNNKRNMNNNSNMNNSSSNIAQSSSSNNNNNSLLNRNKSHSIIGLHSSKYESSLKD 1141
                                                                             
  Rat   563 ----------------------------------------------------------------- 562

  Fly  1142 NYSAKNVNLKNQLLNGGIKSDTYESVCPPEDVAERTKQTHKNSMIRNNLADASSNNNTSGSINNI 1206
                                       |.|.:|.|....|...:..:..|.|             
  Rat   563 ---------------------------PGEPLAARPGMAHSEEVRVHQPAPA------------- 587

  Fly  1207 SNIGNMNGGNQSSRNLKRVSSAPPMQNLA----VVNG-----------PPPPPLPPPLRAPVQQQ 1256
                ...|.|..|.:.....||||...|.    |.||           ||||| ||||       
  Rat   588 ----GCTGSNPVSHSSLSGPSAPPQAALLPGNHVHNGCSADSKASRELPPPPP-PPPL------- 640

  Fly  1257 RNNLSVDQPNSMTGNNGIYKKNVFGPNQGPTNANGTGGAAPPPVPAPNPVATEAVDSDSGLEVVE 1321
                    |.::                          ::|||.|   |:..|...:..|     
  Rat   641 --------PEAL--------------------------SSPPPAP---PLPIEGAGAACG----- 663

  Fly  1322 EPSLRPSELVRGNHNRTMSTISANKKAKLLNAGSTNGSSIAASSDDSQSRYGGSVHAANGSAANG 1386
                         ..|:.|:..:.|...:::....|...:|      :.:.|.|:          
  Rat   664 -------------QRRSSSSTGSTKSFNMMSPTGDNSELLA------EIKAGKSL---------- 699

  Fly  1387 HFYGYSEGNKNQGSNGNGNGNGNGGGGNYHSHPNQPHYATGQPHQYTPSLYGGGSSAEDHYELTQ 1451
                                              :|   |.|....| :::.|            
  Rat   700 ----------------------------------KP---TPQSKGLT-TVFSG------------ 714

  Fly  1452 QQQQIYGETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNKSQDGVTHLIKPSEYLKSISIDKRSCP 1516
                        |||                 |.|.|...|..|:    |.             |
  Rat   715 ------------SGQ-----------------PASQPESPQPAVS----PG-------------P 733

  Fly  1517 SSARSTDTEDYMQIQIAQQQSHPHQHQHHPHPHPHPHHPHQLHGMGEQPPLPPP--PPPLPHGML 1579
            |.|||                                            |.||.  |.||.:|.:
  Rat   734 SRARS--------------------------------------------PTPPASGPQPLLNGSI 754

  Fly  1580 PPQPPMGPPMGVAGGQDATMSGKSHKPKKPHGSAPNSQDTATRKQHQPLSAISIQDLNSVQLRRT 1644
            .|.||            ||::                                            
  Rat   755 VPAPP------------ATLA-------------------------------------------- 763

  Fly  1645 DTQKVPKPYQMPARSLSMQCLTSSTETYLKSDLIAELKISKDIPGIKKMKVEQQMASRMDSEHYM 1709
                                                       ||:           .:|.|.. 
  Rat   764 -------------------------------------------PGV-----------HLDVEAL- 773

  Fly  1710 EITKQFSGNNYVDQIPERDQAGNAIPDWKRQMMAKKAAERAKKDFEERMAQEAESRRLSQIPQWK 1774
                          ||..|:.|..||:||||:|.:|..::.:::.|:|..:|.|..||:.:|.|:
  Rat   774 --------------IPTLDEQGRPIPEWKRQVMVRKLQQKMQEEEEQRRKEEEEEARLASLPAWR 824

  Fly  1775 RDLLARREETENKLKAAIYTPKVEENNRVADTWRLKNRAMSIDNININLAGMEQHYQQI 1833
            ||:|.::.|.|.:.|.     |.||..::.:..|.|.::..:..:..:.|.:....:|:
  Rat   825 RDILRKKLEEEREQKR-----KEEERQKLEEIQRAKEQSEKLRTLGYDEAKLAPWQRQV 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fNP_001036284.1 ANK repeat 371..399 CDD:293786 10/27 (37%)
ANKYR <558..695 CDD:440430 70/150 (47%)
ANK repeat 566..595 CDD:293786 16/28 (57%)
ANK repeat 597..629 CDD:293786 14/31 (45%)
ANK repeat 631..660 CDD:293786 19/28 (68%)
ANK repeat 663..691 CDD:293786 11/41 (27%)
EspnXP_038966608.1 ANK repeat 39..67 CDD:293786 8/30 (27%)
ANKYR 52..324 CDD:440430 96/343 (28%)
ANK repeat 69..101 CDD:293786 4/31 (13%)
ANK repeat 103..135 CDD:293786 6/35 (17%)
ANK repeat 137..169 CDD:293786 11/96 (11%)
ANK repeat 171..202 CDD:293786 17/30 (57%)
ANK repeat 205..237 CDD:293786 14/31 (45%)
ANK repeat 239..269 CDD:293786 20/29 (69%)
ANK repeat 271..302 CDD:293786 11/30 (37%)
WH2 682..707 CDD:460490 7/77 (9%)

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