DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8915 and hrpA

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_415931.4 Gene:hrpA / 948444 ECOCYCID:G6732 Length:1300 Species:Escherichia coli


Alignment Length:792 Identity:212/792 - (26%)
Similarity:359/792 - (45%) Gaps:148/792 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISV 272
            :||:.::::.||..::..||:|:.|.|||||:||||:..:|.....:.  .|..:||||:||.:|
E. coli    76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG--LIGHTQPRRLAARTV 138

  Fly   273 SERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHE 337
            :.||::|....||..:||.:|.:...|.||::.|.|.|.||..:..|:.....:|  :|||||||
E. coli   139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT--IIIDEAHE 201

  Fly   338 RDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILS 402
            |.|:.||||...|..|.:.|.|::::.|||:|.|..|.:|....:::|.||::.|.:.:      
E. coli   202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY------ 260

  Fly   403 KTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSLLELL--LRQGDAGAVIV 465
                          :|..:|.                .|.:.|.:.::.:.:  |.|...|.:::
E. coli   261 --------------RPIVEEA----------------DDTERDQLQAIFDAVDELSQESHGDILI 295

  Fly   466 YLPGYSDMTSLLARLESSLPREQITIILLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITI 530
            ::.|..::......| :.|......|:.|::::.||||.:||:::.|.|  |:|:||:.:||:|:
E. coli   296 FMSGEREIRDTADAL-NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRR--IVLATNVAETSLTV 357

  Fly   531 PDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNL 595
            |.:.||||.|.|::..|.......:|.:..||||.|.||.||.|||..|.|.|||..|.......
E. coli   358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422

  Fly   596 YTIPEIMRRTLDEICL-LTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVL--DERD-- 655
            :|.|||:|..|..:.| :|.|...|.....|    ::.|.|..:......|:.||.:  ||:.  
E. coli   423 FTDPEILRTNLASVILQMTALGLGDIAAFPF----VEAPDKRNIQDGVRLLEELGAITTDEQASA 483

  Fly   656 -EVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRV 719
             ::||||..:::||:..::.:.::.:....|:...:||.:..|::||....:::.:.|.::..|.
E. coli   484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548

  Fly   720 LFAGDGMSDSLAVIKLY----EEFTNLKRKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFR 780
               .|..||.||.:.|:    |:...|........|..:::....:..:....:.||..|     
E. coli   549 ---HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV----- 605

  Fly   781 FSEASARLASSFNNDT---NMIRLALTAGLYPKLAYMDRENKNQ--------------------- 821
                 ..|....|::.   ..|.:||..||...:...|.:.:..                     
E. coli   606 -----KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665

  Fly   822 ---LVAEGDPLVQVSRSSCLRGKKKQKDLASEWI-----LFVEKT-------RTADQISSLEHTT 871
               :|||   ||:.||   |.|:...: :..||:     ..:::|       |....:.:.|..|
E. coli   666 KWVMVAE---LVETSR---LWGRIAAR-IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVT 723

  Fly   872 LVSGLMVALAGGKRFITEAHGSEM--LLCLDSWIR------------------LKCPAEFGLQLH 916
             |.||.:..|      .:.:.|::  .||.:.:||                  ||..||.....|
E. coli   724 -VYGLPIVAA------RKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEH 781

  Fly   917 KVR---MLTDRE 925
            |.|   :|.|.|
E. coli   782 KSRRRDILVDDE 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206
HrpA 208..>702 CDD:441249 155/501 (31%)
OB_NTP_bind 799..884 CDD:400182 25/120 (21%)
hrpANP_415931.4 PRK11131 5..1298 CDD:182986 212/792 (27%)
Blue background indicates that the domain is not in the aligned region.

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