DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and PRP2

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_014408.1 Gene:PRP2 / 855745 SGDID:S000005294 Length:876 Species:Saccharomyces cerevisiae


Alignment Length:843 Identity:218/843 - (25%)
Similarity:368/843 - (43%) Gaps:159/843 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TGKQK-------TRPGKNAKADAGDKLKSEDEKMLRQLVDDFLQSCEPEKQLPGLTKAQRSHVHR 99
            |||::       ||...||.......|..|::|              ..|......:.:||   |
Yeast     8 TGKRRVKRTYEVTRQNDNAVRIEPSSLGEEEDK--------------EAKDKNSALQLKRS---R 55

  Fly   100 LAQHRGLKTVSKGPEENRV---LFISRPQSDGQQQYILCNTKLDICPPLLD--------VLGQMA 153
            ...::.....::|||:|.:   ...|:.:|....:.|..|.:|.....||.        ......
Yeast    56 YDPNKVFSNTNQGPEKNNLKGEQLGSQKKSSKYDEKITSNNELTTKKGLLGDSENETKYASSNSK 120

  Fly   154 GNVE--RRLMNSVGDLKCNKQQ-YKDIRL----------PSNFGLVG------------------ 187
            .|||  .::.|:....|.|:|: :::.:|          |.:..|.|                  
Yeast   121 FNVEVTHKIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTN 185

  Fly   188 --QRLIP--------------PPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGS 236
              ..|:|              ..:..|...||..|:.||:::.::.:|..::::|||||.|.|||
Yeast   186 EEDDLLPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGS 250

  Fly   237 GKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSN 301
            ||:||||||::|.....:..::|.::||||:||.||:.|::.|.....|..|||.||...:.:.|
Yeast   251 GKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPN 315

  Fly   302 -TVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMS 365
             |||...|.|.|||....|.|  ....:.::|||||||.|.||.|:...|..|.:.|.|:|::.|
Yeast   316 KTVLKYMTDGMLLREFLTDSK--LSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISS 378

  Fly   366 ATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAA 430
            |||:.:..|.:|....:.:|.||.:.|.|::  .:..:..|:|                    ||
Yeast   379 ATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY--TLQPEANYIH--------------------AA 421

  Fly   431 YYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLPR-----EQIT 490
                            |.::.::...|...|.::|:|.|..::.....:||..:.:     :|:.
Yeast   422 ----------------ITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMI 470

  Fly   491 IILLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQ 555
            |..:::.:...:|.|:|:..|....|::|:|||.:||:||..:.||||.|..|..:|..:...:|
Yeast   471 ITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQ 535

  Fly   556 LTLTWISQADAKQRAGRAGRVCHGNCYRLYDN-DRMARMNLYTIPEIMRRTL-DEICLLTKLAAP 618
            |.....|:|...|||||||||..|.|:|::.. ..:..:.|...|||.|..| :.:.||..|...
Yeast   536 LLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVT 600

  Fly   619 DKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCL-VYSIY 682
            |  :..|  ..:|.|....:.:|...|.:||.|:.:..:|.||.::.|.|...:..|.| ..:.:
Yeast   601 D--LIKF--PLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATH 661

  Fly   683 LRCL----DSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLK 743
            .:|.    :.:.|::..|.....|:     |:|.....| ||  .:..||.:..::::.::.|.|
Yeast   662 EQCQGVLEECLTIVSMLHETPSLFI-----GQKRDAAAS-VL--SEVESDHILYLEIFNQWRNSK 718

  Fly   744 RKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDTNMIRLALTAG 806
            ..  ..:|:.:.|....|       ..:|:...::||.||   ::.....||...:::...||
Yeast   719 FS--RSWCQDHKIQFKTM-------LRVRNIRNQLFRCSE---KVGLVEKNDQARMKIGNIAG 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 10/61 (16%)
DEXDc 214..395 CDD:214692 73/181 (40%)
DEXDc 226..368 CDD:238005 64/142 (45%)
HELICc 479..575 CDD:197757 34/100 (34%)
HA2 648..733 CDD:214852 21/89 (24%)
OB_NTP_bind 783..884 CDD:285018 5/24 (21%)
PRP2NP_014408.1 PTZ00121 <7..174 CDD:173412 36/182 (20%)
HrpA 185..876 CDD:224557 182/649 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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