DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and AT1G58060

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_176103.2 Gene:AT1G58060 / 842173 AraportID:AT1G58060 Length:1459 Species:Arabidopsis thaliana


Alignment Length:979 Identity:289/979 - (29%)
Similarity:457/979 - (46%) Gaps:173/979 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TVSKGPEENRVLFISRPQSDGQQQYILCNTKLDICPPLLDV-------LGQMAGNVERRLMNSVG 165
            |:....|:.|..|:.:...:........::..:...||:|.       ||.:..| .|...:|..
plant   521 TIQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDDLGVVKSN-NRAKRDSYI 584

  Fly   166 DLKCNKQQYKDIRLPSNFGLVGQRLIPPPQSNRNRNIQHE-----RRSLPIYKQRESILNVLQRD 225
            :.:|...|.|                   |.|:.|..:::     |.:|||.:.:..||..|:..
plant   585 EAECLSLQRK-------------------QENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEK 630

  Fly   226 QVLIIKGATGSGKSTQLPQYILEWAAE--HRAPVRIVVSQPRRIAAISVSERISKERGE-APG-- 285
            .||::.|.|||||:||:||:||:...:  |.....|:.:||||||||||::|::.||.| :||  
plant   631 DVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLD 695

  Fly   286 -TTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLAT 349
             :.|||.:|:....|..|.|:..|:|.|||.||.|:.  ..:.||:|:||.|||.|..||||:..
plant   696 DSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRT--LNDVTHIIVDEVHERSLLGDFLLIIL 758

  Fly   350 KLELQK------NPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYM- 407
            |..::|      :..|:::|||||:|.:..|.|||...|:..:||:..|:.:.||:|.....|: 
plant   759 KSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLL 823

  Fly   408 ----------HPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVS------------- 449
                      ...::..||....:.....|:.|.:|.:.::..|..|...||             
plant   824 APDSPAALRSDTSIKDKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQN 888

  Fly   450 ------------LLELLLRQGD----AGAVIVYLPGYSDMTSLLARLESS-----------LPRE 487
                        |||.|:...|    .||::::|||.:::..||..|.:|           ||  
plant   889 LKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLP-- 951

  Fly   488 QITIILLHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTI 551
                  |||.:.:|||||||...| |:| |:|.:|||.:|||||.|::||||:|..|...|:...
plant   952 ------LHSSIASSEQRKVFLRPPKGLR-KVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQK 1009

  Fly   552 DASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTLDEICLLTKL 615
            ..|.:...|||||:|:||.||||||..|.|:.||...|..: |..|.:||::|..|.|:||..||
plant  1010 KLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKL 1074

  Fly   616 AAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYS 680
            .... .|:.||:.||:.|.:.|:..:.|.|..:|.::..:|:|||||.:|:||:.|.|||.|:|.
plant  1075 LGLG-HIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYG 1138

  Fly   681 IYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFA--------------GDGMSDSLA 731
            ....||..::.|||:.|.:.||:.    .|...|.:.||..|              .|..||.|.
plant  1139 GIFGCLSPILSIAAFLSYKSPFIY----PKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLL 1199

  Fly   732 VIKLYEEFTNLKR----KDIGDFCERNFICRNAMEMF----VSAASTLRDT-VYRIFRFSEASAR 787
            ::..|:::..:.:    |....|||..|:..:.|.|.    |...:.|.|. :..:.:..|.|.|
plant  1200 MMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGR 1264

  Fly   788 LASS--------------FNNDTNMIRLALTAGLYPKLAYMDR----ENKNQLVAEGDPLVQVSR 834
            ...:              ::....:::..|.|||||.:|..|:    ...|.|..:|:.  ..|.
plant  1265 KKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQ--TKSY 1327

  Fly   835 SSCLRGKKKQ-----------KDLASEWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKRFIT 888
            |:...|:::.           |...:.:::|:||..|....  |..||:||...:.|.||...:.
plant  1328 SAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVY--LRDTTIVSPFSILLFGGSINVH 1390

  Fly   889 EAHGSEMLLCLDSWIRLKCPAEFGLQLHKVRMLTDREFAKLV-ATRKLSLMSDFIGPETVRRLLE 952
            ...||   :.:|.|:::..||:..:...::|:........|: ...|..::.:.:....|..|:|
plant  1391 HQSGS---VTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIE 1452

  Fly   953 ADVP 956
            ...|
plant  1453 EGKP 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 4/14 (29%)
DEXDc 214..395 CDD:214692 80/192 (42%)
DEXDc 226..368 CDD:238005 67/153 (44%)
HELICc 479..575 CDD:197757 47/107 (44%)
HA2 648..733 CDD:214852 33/98 (34%)
OB_NTP_bind 783..884 CDD:285018 29/129 (22%)
AT1G58060NP_176103.2 DSRM 411..492 CDD:214634
HrpA 574..1371 CDD:224557 260/836 (31%)
DEXDc 632..782 CDD:238005 66/151 (44%)
Helicase_C 904..1035 CDD:278689 58/139 (42%)
HA2 1105..1182 CDD:214852 29/80 (36%)
OB_NTP_bind 1242..1387 CDD:285018 32/148 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18934
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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