DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and ABO6

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_680142.2 Gene:ABO6 / 830371 AraportID:AT5G04895 Length:1161 Species:Arabidopsis thaliana


Alignment Length:1041 Identity:306/1041 - (29%)
Similarity:487/1041 - (46%) Gaps:182/1041 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DSEEAV----KRGRRQGRKKAQPMPEQAVVLVVNGRVTGGPKGTGKQKTRPGKNAKADAGDKLKS 63
            |||:.:    ||.||...:.:.......:...:.|:|....|       .|..|.:.|..||...
plant   108 DSEQEIVSRDKRDRRDYEQISNLAKRMGLYSEIYGKVVVASK-------VPLPNYRPDLDDKRPQ 165

  Fly    64 EDEKM---LRQLVDDFLQSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFISRPQ 125
            .:..:   |::.|:..||.....:||.. .||...    :|..:..|...:.|:||...|:.   
plant   166 REVVLPLSLQRRVEGLLQEHLDSQQLSS-GKANEC----VADSQPPKQTEELPDENSDSFLD--- 222

  Fly   126 SDGQQQYILCNTKLDICPPLLDVLGQMAGNVERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQRL 190
                                        |:|..:::           |.:.:|: .|.....|  
plant   223 ----------------------------GSVMEKVL-----------QRRSMRM-RNMQRTWQ-- 245

  Fly   191 IPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAE--H 253
                :|...|.:...|::||.:|.:|.:|..:.|:||:::.|.||.||:|||||||||...|  .
plant   246 ----ESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGR 306

  Fly   254 RAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAM 318
            .|...|:.:|||||:|::||||:|.||||..|.|||:.:|:......||.|:..|||.|||.|..
plant   307 GAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLS 371

  Fly   319 DKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVM 383
            |:.  ....||:.:||.|||.::.|||::..|..|.:.|.|||||||||::.|..|||:||...:
plant   372 DRN--LNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTI 434

  Fly   384 DVEGRSFEVSIYHLEDILSKTGY----------------------MHPRMEKFLGKPTGKETPSE 426
            .:.|.:..|..:.|||:|..|||                      :.||..|.......:|..|:
plant   435 HIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEALSK 499

  Fly   427 LLAAYYGGNT-----IVHPD-IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLP 485
            .....|...|     ...|| |..:||.::|..:.|:...|||:|:|.|:.|:.||..::::. |
plant   500 SNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAH-P 563

  Fly   486 ----REQITIILLHSQVDNSEQRKVF-RTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMK 545
                ..::.:::.|..:..:|||.:| |..|.:| ||:|:||:.:.||||.|:::|:|.|.||..
plant   564 LLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIR-KIVLATNMAEASITINDVVFVVDCGKAKET 627

  Fly   546 TYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDN---DRMARMNLYTIPEIMRRTLD 607
            |||:..:...|..:|||||.|:||.|||||:..|.||.||..   |..|.   |.:||::|..|:
plant   628 TYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAE---YQLPELLRTPLN 689

  Fly   608 EICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQ 672
            .:||..| :...:.|..||:.||..|...||..:...||::|.|||::.:|.||.:::.||:..:
plant   690 SLCLQIK-SLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPK 753

  Fly   673 IGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYE 737
            :||.|:.....||.|.::.|.:..||||||:|  .:.||.....:::.|:....||.:|:::.:|
plant   754 LGKMLIMGAIFRCFDPILTIVSGLSVRDPFLL--PQDKKDLALSAKLRFSAKDYSDHMALVRAFE 816

  Fly   738 EFTNLKRKDIG-DFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEA-----SARLASSFNNDT 796
            .:.:.:|:... :||.|||:....::    |..:||.....|.:  ||     ...|.:..:::.
plant   817 GWKDAEREGSAYEFCWRNFLSAQTLQ----AIHSLRKQFNYILK--EAGLVHDDLALNNKLSHNQ 875

  Fly   797 NMIRLALTAGLYPKLA-YMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASEWILFVEK--- 857
            :::|..:.:||:|.:| .:.||.........|..|.:..:|.   ..:...:...|::|.||   
plant   876 SLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSV---NSRFPTIPYPWLVFGEKVKV 937

  Fly   858 --------TRTADQISSLEHTTLVSGLMVA----LAGGKRFITEAHGSEMLLCLDSWIRLKCPAE 910
                    |...|....|...:|.:|:.|.    |.|...|..:.:.:|      |:::||    
plant   938 NAVLIRDSTGVPDSSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAE------SYVKLK---- 992

  Fly   911 FGLQLHKVRMLTDREFAKLVATRKLSLMSDFIGPE------TVRRLLEADVPSTCLAEGKSLLDR 969
                         .|..||: .:||...|..|..|      .|:.|:..|   .|  ||:.:..|
plant   993 -------------EELDKLL-QKKLEDPSMDIHKEGKYLMLAVQELVAGD---QC--EGRFVFGR 1038

  Fly   970 D 970
            |
plant  1039 D 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 14/61 (23%)
DEXDc 214..395 CDD:214692 83/182 (46%)
DEXDc 226..368 CDD:238005 71/143 (50%)
HELICc 479..575 CDD:197757 39/100 (39%)
HA2 648..733 CDD:214852 29/84 (35%)
OB_NTP_bind 783..884 CDD:285018 25/121 (21%)
ABO6NP_680142.2 HrpA 238..1007 CDD:224557 262/817 (32%)
P-loop_NTPase <247..>291 CDD:304359 16/43 (37%)
DEXDc 277..419 CDD:238005 71/143 (50%)
Helicase_C 529..621 CDD:278689 31/93 (33%)
HA2 728..812 CDD:214852 29/85 (34%)
OB_NTP_bind 849..960 CDD:285018 21/115 (18%)
DSRM 1059..1122 CDD:238007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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