DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and dhx30

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_012820430.2 Gene:dhx30 / 779538 XenbaseID:XB-GENE-5777932 Length:1184 Species:Xenopus tropicalis


Alignment Length:1057 Identity:283/1057 - (26%)
Similarity:484/1057 - (45%) Gaps:209/1057 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEEAVKRGRRQGRKKAQPM-------------------PEQAVVLVVNGRVT--GGPKG------ 41
            :||:|.|.||:..::::.:                   |:..:..||. |.|  ..|:|      
 Frog   195 TEESVPRTRRKASRESRSLSIDLAEDADALQALGQFSQPKSLLATVVQ-RATSSSSPRGHVHYQC 258

  Fly    42 ----------------------TGKQKTRPGKNAKADAGDKLKS-----EDEKMLRQLV--DDFL 77
                                  .|:::|.....|.|.|..|||:     .:.|.|...:  ..::
 Frog   259 EGGRIKSCHLTLNWPETLTFVAQGRRRTEAETKAAALACQKLKALGLLDTNNKPLSHAMYHQPYV 323

  Fly    78 QSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFISRP--QSDGQQQYILCNTKLD 140
            |....:::     :|:|.||.        :.|.:..|:....:...|  .||..:.|:  ...::
 Frog   324 QQHREQQR-----QAKRFHVP--------EPVLQRIEDYLYQYPLEPPYPSDQTEAYV--EADME 373

  Fly   141 ICPPLLDVLGQMAGNV------------ERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQRLIPP 193
            ..|.:.:..|.:...:            ..|:..|:.||..::|| :::.|              
 Frog   374 YAPDMEEASGSINDAITGRKFRPLSLQETERISCSLRDLWRSRQQ-QEVAL-------------- 423

  Fly   194 PQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWA--AEHRAP 256
                         .|||:..|||||::.::|..|::|.|.||.||:|::||:|||.|  ....|.
 Frog   424 -------------MSLPVDGQRESIVSAIERHPVVVIAGDTGCGKTTRIPQFILEDAILRGQGAD 475

  Fly   257 VRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQC-SSNTVLMLTTSGCLLRALAMDK 320
            ..::::|||||:|:||:.|:..|.|......|||.:|:.... .....|:..|.|.||:.|  ..
 Frog   476 CNMLITQPRRISAVSVAHRVGHELGPTLRRNVGYQVRLESMLPPRGGALLFCTVGVLLKKL--QG 538

  Fly   321 KSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDV 385
            ....:..:|:::||.||||::|||||:..|:..|:||.|::||||||.|.|.:|.||||..::.|
 Frog   539 NPTLEGVSHILVDEVHERDVNTDFLLILLKMVQQQNPKLKVVLMSATGDNERISRYFGGCPIIRV 603

  Fly   386 EGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSL 450
            .|..:.|..::|||:.:           .||....:.||:::....        ||:  |||.|.
 Frog   604 PGFMYPVKEHYLEDVAA-----------MLGTSADQLTPADMEECV--------PDL--DLISSA 647

  Fly   451 LELLLRQGDAGAVIVYLPGYSDMTSLLARLE--SSLPREQITIILLHSQVDNSEQRKVFRTYP-G 512
            :..:...|..|.::.:|||:.::..:..|||  ....:|...|:.:||.:...:|:.:|:..| |
 Frog   648 ILHIADNGPPGGILCFLPGWQEIRGVQQRLEEKQQWAKENFLILPVHSNIPMMDQQSIFQRPPQG 712

  Fly   513 VRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVC 577
            || ||:|:|||.:||:||.|:::|:|:|:.|.:.||.....|.|..:|:|:::..||.|||||..
 Frog   713 VR-KIVLATNIAETSVTIDDIVHVVDSGMQKEQRYDLRTKVSCLETSWVSKSNVTQRRGRAGRCQ 776

  Fly   578 HGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSC 642
            .|..|.|:..::...|..:.:|||:|..|:.:.|..|:..|:.....||:.||::|...|:..:.
 Frog   777 PGFSYHLFTREQHKAMATFQVPEILRTPLENLVLQAKVHVPEMTAVEFLSQALESPESQAITDAV 841

  Fly   643 SRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIE 707
            ..|:.:.|||..:::|.|||.|:.:....::.|.:|.:...|||..|::|.|. ..||||    :
 Frog   842 QLLQEIRVLDSEEQLTLLGHRVSNISTDPKLAKAIVLASIFRCLHPMLVIVAC-LTRDPF----Q 901

  Fly   708 RGKKSGQQISRV--LFAGDGMSDSLAVIKLYEEFTNLKRKDIG----DFCERNFICRNAMEMFVS 766
            .|.::..|::|.  ..:.:..||.||.::..:.:..:..:..|    :|.|...:...|:.....
 Frog   902 GGLQNRAQVNRAKKALSAETRSDHLAYVRALQGWEEVLSRRNGTARENFLETYSLSPGALRFIQG 966

  Fly   767 AASTLRDTVYRIFRFSEASA-----RLASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEG 826
            ..:.....||..|..||||.     .|.:.|:::..:::..|.|||||.                
 Frog   967 LVTQFSSNVYDAFLVSEASECRDGYSLCNQFSHEEELLKAVLLAGLYPN---------------- 1015

  Fly   827 DPLVQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTL-----------VSGLMVAL 880
              ||||.|....:||.|...|       :.|||....:  |..||:           ::..:...
 Frog  1016 --LVQVRRGFVSKGKFKPNSL-------LYKTREGPVL--LHRTTINRDEKHLPSPWLTYFLAVK 1069

  Fly   881 AGGKRFITEA---HGSEMLLCLDSWIRLKCPAEFGLQLHKVRMLTDREFAKLVATRK-LSLMSD- 940
            :||..|:.::   |...:||..||.:.|   .:.|.||  :..|.|.:..||.:.|: ::|::| 
 Frog  1070 SGGSVFVRDSSMVHPLAVLLLADSSVNL---IDRGQQL--LVSLCDCDLLKLESDRRTIALLNDL 1129

  Fly   941 -FIGPETVRRLLEADVP 956
             ......|:|.|..::|
 Frog  1130 RLALSRMVKRSLSQELP 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 9/60 (15%)
DEXDc 214..395 CDD:214692 75/183 (41%)
DEXDc 226..368 CDD:238005 58/144 (40%)
HELICc 479..575 CDD:197757 39/98 (40%)
HA2 648..733 CDD:214852 27/86 (31%)
OB_NTP_bind 783..884 CDD:285018 27/116 (23%)
dhx30XP_012820430.2 HrpA 425..1061 CDD:224557 217/691 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 1 1.000 - - FOG0000258
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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