DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and dhx9

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_002937403.1 Gene:dhx9 / 733723 XenbaseID:XB-GENE-967775 Length:1257 Species:Xenopus tropicalis


Alignment Length:1113 Identity:322/1113 - (28%)
Similarity:511/1113 - (45%) Gaps:185/1113 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEEAVKRGRRQGRK-KAQPMPEQAVVLVVNGRVTGGP------------------KGTGKQKTRP 49
            |:|....|..||.. ...|:..:..     ...||||                  ..||......
 Frog    77 SDEVPSLGAEQGDSIDGAPVKSEGF-----SGPTGGPLPPHLSLQAETSDAAPMRANTGCNPPAY 136

  Fly    50 GKNAKADAGDKLKSEDEKMLRQLVDDFLQSCEPEKQLPGL--------TKAQRSHVHRLAQHRG- 105
            |..|:.:.|..||....|...|.....|:|.|.:.. .||        .||:.:...:..:.:| 
 Frog   137 GGGAQWERGANLKDYYAKRDEQEAQATLESEEVDLN-AGLHGNWTLENAKARLNQFFQKEKTQGE 200

  Fly   106 LKTVSKGPEENR------VLFISR------PQSDGQQQYILCNT-KLDICPPL--LDVLGQMAGN 155
            .|....||:.||      .|::.:      .:..|..:.:...: .|.|...|  |.|:...:|.
 Frog   201 YKYSQVGPDHNRSFIAEMTLYVKQLGRRITAREHGSNKKLAAQSCALSIVRQLYHLSVIEPYSGL 265

  Fly   156 VERRLMNSVGDLKCN------KQ-----QYKDIRLP-----------SNFGLV-----GQR---- 189
            .:::...:|...:.|      ||     |...|.||           .|.|.:     .|:    
 Frog   266 TKKKEGEAVEPYQVNLNPDVVKQLQSTIQELGIELPYPPQDPSQPVSLNLGKLVHFEPSQKQSHS 330

  Fly   190 -LIP--PPQSN--------------------------RNRNIQH-----------ERRSLPIYKQ 214
             ::|  |||.|                          :|.::.|           :|.|||:.|.
 Frog   331 GVVPWSPPQENWNPWTSSNIDEGPLAFAPQEQISAELKNEHMYHMQDPNMKQVLIDRESLPVKKF 395

  Fly   215 RESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAA--EHRAPVRIVVSQPRRIAAISVSERIS 277
            .|.|::.:....|:||:||||.||:||:|||||:...  :..|...|||:|||||:|:||:||::
 Frog   396 EEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDECIRNDRAAQCNIVVTQPRRISAVSVAERVA 460

  Fly   278 KERGEAPGTTVGYNIR----MNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHER 338
            .||||..|.:.||::|    :.|..:|   ::..|.|.|||.|    ::..:..:|:|:||.|||
 Frog   461 FERGEEIGKSCGYSVRFESVLPRPHAS---MLFCTVGVLLRKL----EAGIRGISHVIVDEIHER 518

  Fly   339 DLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSK 403
            |::|||||:..:..:|..|.:|::|||||:|......||....:::|.||:|.|..|.|||.:..
 Frog   519 DINTDFLLVVLRDVIQAFPDIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYFLEDCIQM 583

  Fly   404 TGYMHPRMEKFLGKPTGK--------ETPSELLAA-YYGGNT------IVHPDIDNDLIVSLLEL 453
            |.::.|..:|   |...|        ||...|:.. .||..|      :...:...:||.:||:.
 Frog   584 TQFIPPPRDK---KKKDKDEEGGDDEETNCNLVCGDDYGPETRRSMSQLSEKETPLELIEALLKY 645

  Fly   454 LLRQGDAGAVIVYLPGYSDMTSLLARLESS--LPREQITIILLHSQVDNSEQRKVFRTYPGVRLK 516
            :......|||:|:|||::.:.::...||.:  .......|:.||||:...||||||...|...:|
 Frog   646 IETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIK 710

  Fly   517 IILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNC 581
            :||||||.:|||||.|::||||:...|:|.:.|..:.:.....|.|:.:.:||.||||||..|.|
 Frog   711 VILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFC 775

  Fly   582 YRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLK 646
            :.|....|..|:..:..|||.|..|.|:.|..||.... .|..||:.|::.||.|||:::...|:
 Frog   776 FHLCSRARFERLETHLTPEIFRTPLHEVALSIKLLRLG-GIGQFLSKAIEPPPLDAVIEAEHTLR 839

  Fly   647 LLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKK 711
            .|..||..||:||||.|:|:||:..::||.::........|::..|:|.....:||   |..|::
 Frog   840 ELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDALCTISAATCFPEPF---ISEGRR 901

  Fly   712 SGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGD-----FCERNFICRNAMEMFVSAASTL 771
            .| .:.| .|||:..||.:|::.:::.:.:.:..  |:     |||...:....:.|...|...|
 Frog   902 LG-YVHR-NFAGNRFSDHVALLSVFQAWDDARMG--GEEAETRFCEHKRLNMATLRMTWEAKVQL 962

  Fly   772 RDTVYRIFRFSEASARLASSFNN---DTNM-IRLALTA-GLYPKLAYMDRENKNQLVAEG-DPLV 830
            ::.:.. ..|.| ...:...|||   |.|: :.::|.| |:||.:.| .:|.:..|..|| :.|:
 Frog   963 KEILVN-SGFPE-ECLMTQVFNNTGPDNNLDVVISLLAFGVYPNVCY-HKEKRKILTTEGRNALI 1024

  Fly   831 QVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKRFITEAHGSEM 895
            ..|..:|....:..| ..|.:.:|.||.||  :..|.:..|:||.|.:.|...|:.:::   .|.
 Frog  1025 HKSSVNCPFSNQDLK-YPSPFFVFSEKIRT--RAISAKGMTMVSPLQLLLFASKKVMSD---GEF 1083

  Fly   896 LLCLDSWIRLKCPAEFGLQLHKVRMLTDREFAKLVATRKLSLMSDFIGPETVRRLLEADVPSTC- 959
            :| ||.||||..|.:....:..:|...:....::....::....|.:..:.:..:.....|||. 
 Frog  1084 IL-LDDWIRLSLPHDESACITALRAALEALVVEVTKEPEILSQLDPVNEKMLNMIRLISKPSTAG 1147

  Fly   960 --LAEGKS 965
              |..|.|
 Frog  1148 ISLVMGNS 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 16/73 (22%)
DEXDc 214..395 CDD:214692 77/186 (41%)
DEXDc 226..368 CDD:238005 66/147 (45%)
HELICc 479..575 CDD:197757 41/97 (42%)
HA2 648..733 CDD:214852 30/84 (36%)
OB_NTP_bind 783..884 CDD:285018 32/106 (30%)
dhx9XP_002937403.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 181..255 CDD:380684 13/73 (18%)
DEXHc_DHX9 333..565 CDD:350730 84/238 (35%)
HrpA 345..>1054 CDD:224557 242/732 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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