DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx34

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001258381.1 Gene:Dhx34 / 684903 RGDID:1584452 Length:1143 Species:Rattus norvegicus


Alignment Length:1088 Identity:281/1088 - (25%)
Similarity:429/1088 - (39%) Gaps:311/1088 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PGLTKAQRSHVHRLAQHRGLKTVSKGPE-------ENRVL----------FISRPQSDGQ----- 129
            |..|:..|.|..|  .|.......:.||       |.|.|          :|.|...:.|     
  Rat     3 PPRTREGRDHRDR--DHHRAPRKEEAPEKWDWNCPETRCLLEDVFFRDEDYIRRGSEECQKFWAF 65

  Fly   130 ----QQYILCNTKLDICPPLLDVLGQMAGNVERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQ-- 188
                |:|....|......|     ||....:.     ::.||.|.    .|.|...|..::|.  
  Rat    66 FERLQKYQHLKTSQKEKDP-----GQPKHGIA-----ALADLPCT----YDPRYRINLSILGPDT 116

  Fly   189 -------RLIPPPQSNRNR-------------------NIQHERRSLPIYKQRESILNVLQRDQV 227
                   :.:||.:.:..|                   .:|.||.:|||.:....||..|:..||
  Rat   117 RGRHGPGKGLPPERVSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQV 181

  Fly   228 LIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNI 292
            :::.|.||.|||||:|||:|.....|     :..:||||||.||:::|:..|.....|:.|||.|
  Rat   182 VVVAGDTGCGKSTQVPQYLLAAGFSH-----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQI 241

  Fly   293 RMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNP 357
            |.....|:.|.::..|.|.|||.:..:.:  ......||:||.|||.|..||||...:..|.:.|
  Rat   242 RFESTRSAATKIVFLTVGLLLRQIQCEPR--LPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRP 304

  Fly   358 HLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYH----LEDILSKTGYMHPRMEKFLGKP 418
            .|:::|||||:::...|:||....|:.|.||.|.:::.:    .|...||:..:.||  .||   
  Rat   305 DLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEAEQSASKSEKLDPR--PFL--- 364

  Fly   419 TGKETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESS 483
                   .:|.|           |||.         ....:.|.::|:|.|.::::::|...::.
  Rat   365 -------RVLEA-----------IDNK---------YPPEERGDLLVFLSGMAEISTVLDAAQAY 402

  Fly   484 LPREQITIIL-LHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKT 546
            ....|..::| |||.:..::|.|||...| ||| |.||||||.:||:||..:.:|:|:|..|..:
  Rat   403 ATLTQRWVVLPLHSALSVADQDKVFDVAPAGVR-KCILSTNIAETSVTIDGIRFVVDSGKVKEMS 466

  Fly   547 YDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLY---DNDRMARMNLYTIPEIMRRTLDE 608
            ||......:|...|||||.|:||.|||||...|.|||||   |.|..|.   |.:|||.|..||.
  Rat   467 YDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAP---YPVPEIRRVALDA 528

  Fly   609 ICLLTK-LAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQ 672
            :.|..| ::..|.:...|    ::.||..:|..:...|:..|.||..:.:||:|.::|:||:.|.
  Rat   529 LVLQMKSMSVGDPRTFPF----IEPPPAASVETAILYLQDQGALDSSEALTPIGSLLAQLPVDVV 589

  Fly   673 IGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIE------------------------------ 707
            |||.::........:.::.|||..||:.||..:.:                              
  Rat   590 IGKMMILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWV 654

  Fly   708 --RGKKSG--------------------------------------------------------- 713
              :.::||                                                         
  Rat   655 QVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLRGAQVVAPRDSYSRLQQRRER 719

  Fly   714 ---QQISRVLFAGDGMSDSLAVIKLYE---------EFTNLKRKDIGDFCERNFICRNAMEMFVS 766
               .|:.|....|.|....  |::|.|         |.:..:|.|..|..:..|..|:.:|...:
  Rat   720 QTLHQLKRQHEEGGGRRRK--VLRLQEDGCSSDEDHEGSASQRADSVDIQDVKFKLRHNLEQLQA 782

  Fly   767 AASTLRDTVYRIFRFSEASARLASSFNNDTNMIRLALTAGLYPKLAYMD-----RENKNQL---- 822
            |||:.:|..                 .:...:::|.|..||||:||..|     |::.:|:    
  Rat   783 AASSAQDLT-----------------RDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQ 830

  Fly   823 -----------VAEGDPLV---QVSRSSCLRGKKKQKDLAS---EWILFVEKTRT-------ADQ 863
                       |....|.|   |...:|...|.:..||..|   :.:.||....|       ..:
  Rat   831 AKQGTVLHPTCVFANSPEVLHTQGPEASGREGSQDGKDQMSCKHQLLAFVSLLETNKPYLVNCVR 895

  Fly   864 ISSLEHTTLVSGLMVALAGGKRFITEAHGSEMLLCLDSWIRLK-CPAEFGLQLHKVRM------- 920
            |.:|:...|.|          |.| :.:|....|..|.|:.|: ..:|..::|....:       
  Rat   896 IPALQSLLLFS----------RSI-DTNGDCSRLVADGWLELQLADSESAVRLLATSLRLRAHWE 949

  Fly   921 -LTDREFAKLVATRKLSLMSD----FIGPETV----RRLLE---ADVP 956
             ..||:.|:....|||....|    .:.|:.|    |.||:   |.||
  Rat   950 SALDRQLAQQAQRRKLEQEEDPESPAVSPQEVAALSRELLQFMAAKVP 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206 12/52 (23%)
HrpA 208..>702 CDD:441249 175/503 (35%)
OB_NTP_bind 799..884 CDD:400182 27/117 (23%)
Dhx34NP_001258381.1 HrpA 161..>627 CDD:441249 177/512 (35%)
OB_NTP_bind 798..909 CDD:400182 28/120 (23%)

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