DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8915 and YTHDC2

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_011541883.1 Gene:YTHDC2 / 64848 HGNCID:24721 Length:1439 Species:Homo sapiens


Alignment Length:1147 Identity:316/1147 - (27%)
Similarity:506/1147 - (44%) Gaps:277/1147 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QPMPEQAVVLVVNGRVTGGPKGTGKQKTRPGKNAKADAGDKLKSEDEKML--RQLVDDFLQSCEP 82
            ||.|             ||..|.|.....||...:|.....::.::|..:  ...::.|....:.
Human    11 QPAP-------------GGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQR 62

  Fly    83 EKQLP-GLTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFISRPQSDGQQ---QYILCNTKLDICP 143
            |.:.| .||..:|:.:|||:|..||.:.|||...||.|.:.:  .||.:   ..:.||...:...
Human    63 EMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK--KDGSETAHAMMTCNLTHNTKH 125

  Fly   144 PLLDVLGQM-AGNVERRLM---NSVGDLKCNKQQYKDIRLPSNFGLVGQRLIPPPQSNRNRNIQH 204
            .:..::.:. ..|.||..:   ...|::...:.:.:::...|  |.:...:...|..........
Human   126 AVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTS--GRLNNGIPQIPVKRGESEFDS 188

  Fly   205 ERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAA 269
            .|:|||:::::|.|:.:::.::|::|.|.|||||:||:||::|:...::..|.||..:||||:||
Human   189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAA 253

  Fly   270 ISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDE 334
            |:|:||::.||.|..|.|:||.||:..:.|..|:|...|:|.|||.| |...|.....||:|:||
Human   254 IAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL-MAGDSTLSTVTHVIVDE 317

  Fly   335 AHERDLDTDFLLLATKLE--LQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHL 397
            .||||..:||||  |||.  |||:|.|:|:|.||.:|:.....|||...|:.::||.|||....|
Human   318 VHERDRFSDFLL--TKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFL 380

  Fly   398 EDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYY-----------------------------G 433
            ||||..|||.:..|.|:..:...:|.....|..:|                             |
Human   381 EDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDEYDLLDDG 445

  Fly   434 GNTI----------------------------VHPDIDN-------------------------- 444
            |:.:                            :|.|||.                          
Human   446 GDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATA 510

  Fly   445 ----------------------------------------------------------------- 444
                                                                             
Human   511 LMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSATLEFGNLDESS 575

  Fly   445 -------------------------------DLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLA 478
                                           |||:.||..:....|||||:::||||.::..|..
Human   576 LVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRD 640

  Fly   479 RL-------ESSLPREQITIILLHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLY 535
            |:       ..|..|.|  :.:|||.:..|:|:||.:..| ||| ||||||||.:||||:.|:::
Human   641 RILFDDKRFADSTHRYQ--VFMLHSNMQTSDQKKVLKNPPAGVR-KIILSTNIAETSITVNDVVF 702

  Fly   536 VIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPE 600
            |||:|..|.|::|:....:.|.:.|||:|.|.||.|||||...|.|:||:...|...|..:..||
Human   703 VIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPE 767

  Fly   601 IMRRTLDEICLLTKLAAP-DKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIV 664
            ::|..|.|:||.|||.|| :..|.:||..|.:.||...|..:...||.:..:|..:::|.||:.:
Human   768 LLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHL 832

  Fly   665 AELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDS 729
            |:||:...:||.::.::.|:|||.::.||...:.||||||..:..:|....:.|..|.....||.
Human   833 ADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDH 897

  Fly   730 LAVIKLYEEFTNLKRKDIG---DFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEA----SAR 787
            :|:::.::.:.  |.:..|   .|||:||:.:..||:.:...:.|...: |...|..|    ..|
Human   898 MALLRAFQAWQ--KARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL-RASGFVRARGGGDIR 959

  Fly   788 LASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEG--DPLVQVSRSSCLRGKKKQ------ 844
            ..::.:.:..:::.||.||:||.|.::||||   ||..|  :..|:...:|.|...:.:      
Human   960 DVNTNSENWAVVKAALVAGMYPNLVHVDREN---LVLTGPKEKKVRFHPASVLSQPQYKKIPPAN 1021

  Fly   845 ------KDLASEWILFVEKTRTADQISSLEHTTLVSGL-MVALAGGKRFITEA------------ 890
                  |.|.::|:::.|.|| |.:|:::...:.|:.: ::...|..|..:.|            
Human  1022 GQAAAIKALPTDWLIYDEMTR-AHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDGI 1085

  Fly   891 ----HGSEM---------LLCLDSWIRLKCPAEFGLQLHKVR 919
                ..|||         .|.||.|:......|....|.::|
Human  1086 PNDSSDSEMEDKTTANLAALKLDEWLHFTLEPEAASLLLQLR 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206 18/58 (31%)
HrpA 208..>702 CDD:441249 212/683 (31%)
OB_NTP_bind 799..884 CDD:400182 27/99 (27%)
YTHDC2XP_011541883.1 R3H_DEXH_helicase 46..104 CDD:100077 18/57 (32%)
HrpA 188..>948 CDD:441249 234/768 (30%)
DEXHc_YTHDC2 193..368 CDD:350745 80/177 (45%)
ANK repeat 505..537 CDD:293786 0/31 (0%)
ANK repeat 539..564 CDD:293786 0/24 (0%)
OB_NTP_bind 971..1066 CDD:400182 26/98 (27%)
YTH 1289..1404 CDD:410979
Blue background indicates that the domain is not in the aligned region.

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