DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx9

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001382485.1 Gene:Dhx9 / 304859 RGDID:1308548 Length:1392 Species:Rattus norvegicus


Alignment Length:971 Identity:303/971 - (31%)
Similarity:466/971 - (47%) Gaps:165/971 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KNAKADAG---DKLKSEDEKMLRQLVDDFLQSCEPE-----KQLPGLTKAQRSH----------- 96
            :||||...   .|.|.:.|....|:..|..:|...|     ||| |.....|.|           
  Rat   182 ENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQL-GRRIFAREHGSNKKLAAQSC 245

  Fly    97 ---VHRLAQHRGL----KTVSKGPEENRV----LFISRPQSDGQQQYILCNTKLDICPPLLDV-- 148
               :.|...|.|:    ..::|..|..||    :|:| |..:.|.|.::....|:|.||.:|.  
  Rat   246 ALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLS-PDLELQLQNVVQELDLEIVPPPVDPSM 309

  Fly   149 -----LGQMAGNVERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQRLIP--PPQSNRN------- 199
                 :|::|.....:..|:||                        ::|  |||||.|       
  Rat   310 PVILNIGKLAHFEPSQRQNAVG------------------------VVPWSPPQSNWNPWTSSNI 350

  Fly   200 ----------------------------RNIQ---HERRSLPIYKQRESILNVLQRDQVLIIKGA 233
                                        .|:|   .||..||:.|....||..:.::.|:||:||
  Rat   351 DEGPLAYASTEQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGA 415

  Fly   234 TGSGKSTQLPQYILE--WAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIR--- 293
            ||.||:||:|||||:  ...:..|...|||:|||||:|::|:||::.||||.||.:.||::|   
  Rat   416 TGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES 480

  Fly   294 -MNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNP 357
             :.|..:|   :|..|.|.|||.|    ::..:..:|:|:||.||||::|||||:..:..:...|
  Rat   481 ILPRPHAS---IMFCTVGVLLRKL----EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYP 538

  Fly   358 HLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKE 422
            .:|:||||||:|......||....:::|.||:|.|..|.|||.:..|.::.|..:|   |...||
  Rat   539 EVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDK---KKKDKE 600

  Fly   423 TP---------SELLAAYYGGNT------IVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSD 472
            ..         :.:....||..|      :...:...:||.:||:.:......|||:|:|||::.
  Rat   601 DDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNL 665

  Fly   473 MTSLLARLE--SSLPREQITIILLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLY 535
            :.::...||  |.....:..|:.||||:...||||||...|....|:||||||.:|||||.|::|
  Rat   666 IYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVY 730

  Fly   536 VIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPE 600
            |||:...|:|.:.:..:.:.....|.|:.:.:||.||||||..|.|:.|....|..|:..:..||
  Rat   731 VIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPE 795

  Fly   601 IMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVA 665
            :.|..|.||.|..||.... .|..|||.|::.||.|||:::...|:.|..||..||:||||.|:|
  Rat   796 MFRTPLHEIALSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 859

  Fly   666 ELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSL 730
            :||:..:.||.::........|::..|:|.....:||   |..||:.| .|.| .|||:..||.:
  Rat   860 KLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPF---ISEGKRLG-YIHR-NFAGNRFSDHV 919

  Fly   731 AVIKLYEEFTNLKRKDIGD-----FCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLAS 790
            |::.:::.:.:.:..  |:     |||:..:....:.|...|...|::.:.. ..|.| ...|..
  Rat   920 ALLSVFQAWDDARMS--GEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILIN-SGFPE-DCLLTQ 980

  Fly   791 SFNN---DTNM-IRLALTA-GLYPKLAYMDRENKNQLVAEG-DPLVQVSRSSCLRGKKKQKDLAS 849
            .|.|   |.|: :.::|.| |:||.:.| .:|.:..|..|| :.|:..|..:|....:..| ..|
  Rat   981 VFTNTGPDNNLDVVISLLAFGVYPNVCY-HKEKRKILTTEGRNALIHKSSVNCPFSSQDMK-YPS 1043

  Fly   850 EWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKRFITEAHGSEMLLCLDSWIRLKCPAE 910
            .:.:|.||.||  :..|.:..|||:.|.:.|...|:..::.    .::.:|.||||:...|
  Rat  1044 PFFVFGEKIRT--RAISAKGMTLVTPLQLLLFASKKVQSDG----QIVFIDDWIRLQISHE 1098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 19/85 (22%)
DEXDc 214..395 CDD:214692 78/186 (42%)
DEXDc 226..368 CDD:238005 67/147 (46%)
HELICc 479..575 CDD:197757 41/97 (42%)
HA2 648..733 CDD:214852 32/84 (38%)
OB_NTP_bind 783..884 CDD:285018 32/106 (30%)
Dhx9NP_001382485.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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