DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8915 and Tdrd9

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_017450003.1 Gene:Tdrd9 / 299343 RGDID:1306942 Length:1396 Species:Rattus norvegicus


Alignment Length:855 Identity:236/855 - (27%)
Similarity:383/855 - (44%) Gaps:167/855 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 MLRQLVDDFLQ------SCEPEKQLPGL-----TKAQRSHVHRLAQHRGLKTVSKGPEENRVLFI 121
            |||:|..|.:.      ......:|.||     .:|.|..|.|..:.......::..:..:...:
  Rat     1 MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPVKATAL 65

  Fly   122 SRP---------QSDGQQQYILCNTKLDICPPLLDVLGQ---MAGNVERRLMNSVGDLKCNKQQY 174
            :||         |...:.:||  |....:....||:.||   .:|...|..:..:.::.|     
  Rat    66 ARPASAFGRSLSQRSSEVEYI--NKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVAC----- 123

  Fly   175 KDIRLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKS 239
                            ||        ...::...|||.:.:|.::::::.:.|:||.||||||||
  Rat   124 ----------------IP--------ETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKS 164

  Fly   240 TQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVL 304
            ||||||:|:...:..|...|||:|||:|.|.|::..|||||....|..|||.:.:.:..:.:|.|
  Rat   165 TQLPQYVLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRL 229

  Fly   305 MLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPH-LRLVLMSATM 368
            :..|:|.||:.:...|.  ....||:.|||.|||..:.|||||..:..|:.|.. ::::|||||:
  Rat   230 IYMTTGVLLQKIVSAKS--LMEFTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATI 292

  Fly   369 DLEALSNYF--------GGGTVMDVEGRSFEVSIYHLEDI--LSKTGYMHPRMEKFLGKPTGKET 423
            :.:..::||        ....|.:|||:...:..|:|.|:  :..:|....|:|:          
  Rat   293 NCKQFADYFAVPVQNKMNPAYVFEVEGKPHTIEQYYLNDLGHIYHSGLPPYRLEE---------- 347

  Fly   424 PSELLAAYYGGNTIVHPDIDNDLIVSLLELL--LRQGDAG--------------AVIVYLPGYSD 472
                        .::..|: .::.|||:::.  |...::|              :|:|:|||..:
  Rat   348 ------------PVITKDV-YEVAVSLIQMFDDLDMKESGNKTWSGAQFVSERSSVLVFLPGLGE 399

  Fly   473 MTSLLARLESSLPREQITIILLHSQVDNSEQRKVFRT-YPGVRLKIILSTNIGQTSITIPDLLYV 536
            : :.:..|.:::..:::.:..|||.|...||..||.: .||.| ||||||||.::|:|:||:.||
  Rat   400 I-NYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYR-KIILSTNIAESSVTVPDVKYV 462

  Fly   537 IDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRM-ARMNLYTIPE 600
            ||..|.:....|...:...|.|:|.|:....||.||||||..|.||||...|.. :.:..:.:||
  Rat   463 IDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPE 527

  Fly   601 IMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVL-------DER---D 655
            ::|..|....|..||....:. ...||.||..|....:.::...||.:|.|       ||.   .
  Rat   528 MLRCPLGSTVLKVKLLDMGEP-RALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDG 591

  Fly   656 EVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVL 720
            |:|.||.::|:||:..|:||.:|......|||..:||||..|:::.|.:.. |....|.: ::|.
  Rat   592 ELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMPF-RQHLDGYR-NKVH 654

  Fly   721 FAGDGMSDSLAVIKLYEEFTNLKR-------KDIGDFCERNFI----CRNAME------------ 762
            |:|...||.||:::.:..:...::       ||..|:...|:|    .|...|            
  Rat   655 FSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIREVAELYEELKNRISQF 719

  Fly   763 -MFVSAASTLRDTVYRI-FRFSEASARLASSFNNDTNMIRLALTAGLYPK---LAYMDRENKNQL 822
             |||.....:.|..|.. .||                ::::.|....||.   ....|.|...:.
  Rat   720 NMFVDPRHPVLDQEYPYKQRF----------------ILQVVLAGAFYPNYFTFGQPDEEMAVRE 768

  Fly   823 VAEGDPLVQV 832
            :|..||...|
  Rat   769 LAGRDPKTTV 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206 12/65 (18%)
HrpA 208..>702 CDD:441249 176/532 (33%)
OB_NTP_bind 799..884 CDD:400182 9/37 (24%)
Tdrd9XP_017450003.1 HrpA 132..>707 CDD:441249 192/604 (32%)
DEAD-like_helicase_N 134..317 CDD:475120 71/184 (39%)
Tudor_TDRD9 919..1018 CDD:410502
Blue background indicates that the domain is not in the aligned region.

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