DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx16

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:997 Identity:258/997 - (25%)
Similarity:419/997 - (42%) Gaps:219/997 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEAV---------KRGRRQG-RKKAQPMPEQAVVLVVNG-RVTGGPKGTGKQK------------ 46
            ||||         ||.||:. |||.|...|:......:| |.|||.|...::|            
  Rat   107 EEAVARDGSSLQKKRKRRKHLRKKQQEEEEEEEEASESGKRKTGGSKSPTEEKPASEDEWERTER 171

  Fly    47 ----------------------------TRPGKNAKADAGDKLK--SEDEKML------------ 69
                                        .|..|.|..:|..:||  .||.|.:            
  Rat   172 ERLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREY 236

  Fly    70 -----RQLVDDFLQSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFISRPQSDGQ 129
                 |:.::|.......|:.|.|..:..|.....|...|.::.:::   |.|        :.|:
  Rat   237 LAKREREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLAR---EYR--------AAGE 290

  Fly   130 QQYILCNTKLDICPPLLDVLGQMA-------------GNVERR----------LMNSVGDLKCNK 171
            |:.:....:..: |.  :..||.|             |..:||          |.....|....:
  Rat   291 QEKLEATNRYHM-PK--ETRGQPARATDIVEEESGAPGEEQRRWEEARLDAASLKFGARDAAAQE 352

  Fly   172 QQYKDI------------------RLPSNFGLVGQRLIPPP---QSNRNRNIQHERRSLPIYKQR 215
            .||:.:                  ..||:         .||   |:.:..:||..|||||::..|
  Rat   353 PQYQLVLEEDETIEFVRAAQLQGDEEPSS---------GPPLSAQAQQKESIQAVRRSLPVFPFR 408

  Fly   216 ESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKER 280
            |.:|..:...|||||:|.|||||:||:|||:.|.....:. ::|..:||||:||:||:.|:::|.
  Rat   409 EELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKG-MKIACTQPRRVAAMSVAARVAREM 472

  Fly   281 GEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAM--DKKSFFKNTTHLIIDEAHERDLDTD 343
            |...|..|||:||.....|..|||...|.|.|||....  |..|:    :.:::||||||.|.||
  Rat   473 GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASY----SVVMVDEAHERTLHTD 533

  Fly   344 FLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMH 408
            .|....|...:..|.|::::.|||:|....|.:|....|..:.||.|.|.|::.           
  Rat   534 ILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYT----------- 587

  Fly   409 PRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDM 473
                        |...::.|.|               .:||:|::.:.| ..|.::|:|.|..::
  Rat   588 ------------KAPEADYLEA---------------CVVSVLQIHVTQ-PPGDILVFLTGQEEI 624

  Fly   474 TSLLARLESSLPR-----EQITIILLHSQVDNSEQRKVFR-TYPGVRLKIILSTNIGQTSITIPD 532
            .:....|:....|     .::.::.:::.:.:..|.::|: |.||.| |::::|||.:||:||..
  Rat   625 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGAR-KVVVATNIAETSLTIEG 688

  Fly   533 LLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDN-DRMARMNLY 596
            ::||:|.|..|.|:|:.......||:|..|:|.|.|||||||||..|.|:|||.. .....:...
  Rat   689 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEET 753

  Fly   597 TIPEIMRRTLDEICLLTK-LAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPL 660
            |:|||.|.:|..:.||.| |...|....:|    ||.||.:.::.:..:|..||.|:...|:|..
  Rat   754 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDF----LDPPPYETLLLALEQLYALGALNHLGELTTS 814

  Fly   661 GHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDG 725
            |..:||||:...:.|.::.|....|.:.::.:||..||.:. :....:.|......:||.|...|
  Rat   815 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS-IFYRPKDKVVHADNARVNFFLPG 878

  Fly   726 MSDSLAVIKLYEEFTNLKRKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLAS 790
             .|.|.::.:|.::......  ..:|..||:...:|.    .|..:|:.:..:....|..   .:
  Rat   879 -GDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMR----RARDVREQLEGLLERVEVG---LT 933

  Fly   791 SFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASEWILFV 855
            |...|...:|.|:|:|.:...|        :|...|...|:..::..:.......:....|:|:.
  Rat   934 SCQGDYVRVRKAITSGYFYHTA--------RLTRSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYH 990

  Fly   856 EKTRTAD----QISSLEHTTLV 873
            |...|..    |:..:|.:.|:
  Rat   991 ELVLTTKEFMRQVLEIESSWLL 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206 11/72 (15%)
HrpA 208..>702 CDD:441249 165/503 (33%)
OB_NTP_bind 799..884 CDD:400182 15/79 (19%)
Dhx16NP_997661.1 PTZ00121 <146..>410 CDD:173412 51/286 (18%)
HrpA 401..>1028 CDD:441249 197/680 (29%)

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