DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx37

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001099396.2 Gene:Dhx37 / 288647 RGDID:1306837 Length:1150 Species:Rattus norvegicus


Alignment Length:1228 Identity:276/1228 - (22%)
Similarity:450/1228 - (36%) Gaps:393/1228 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RGRRQGRKKAQPMPEQAVV------------------LVVNGRVTGGPKGTGKQKTR---PGKNA 53
            :||.|...:....||...|                  ||:.||        .|:||:   |.|..
  Rat    11 KGRLQAESRPAKGPEAPPVRLELEDKDVLKGVDASNALVLPGR--------KKKKTKAPPPSKKE 67

  Fly    54 KADAGDKLKSEDEKMLRQLVDDFLQSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPEENRV 118
            :    ..|..::.|:|:::::...:..:..:.|..|::.|.|.    |:.....|.:|....:|:
  Rat    68 R----KPLTKKERKVLQKVLEQKEKKSQRAELLQKLSEVQVSE----AEMSLFYTTAKLGTGDRM 124

  Fly   119 LFI-----SRPQSDGQQQYILCNTKLDICPPLLDVLGQMAGNVERRLMNSV-------------- 164
            ..|     .:|.:.||::                 :..::|...:|..:|.              
  Rat   125 YHIKERKPDQPAAQGQEK-----------------VSSLSGAHRKRHRSSSTEEDSEASEDSEPE 172

  Fly   165 ------------GDLKCNKQQYKDIRLPSNFGLVGQRLIPPPQS--------------------- 196
                        .||........:|:.|          :|.||.                     
  Rat   173 EVTADQPRTSTGADLVHPPPATSEIKSP----------VPTPQPPPPGTSAPPETPASAPPPALA 227

  Fly   197 --------NRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILE--WAA 251
                    ||...:|.||..|||..:.::|:..:....::|:.|.|||||:||:||::.|  :::
  Rat   228 KPAVFIPVNRTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSS 292

  Fly   252 EHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRAL 316
            |...   |.|::|||:||:::|:|::||. ......|.|.||.....:..|.:...|.|.||:.:
  Rat   293 EDSI---IGVTEPRRVAAVAMSQRVAKEM-NLSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 353

  Fly   317 AMDKKSFFKNTTHLIIDEAHERDLDTDFL--LLATKLELQKNPH--LRLVLMSATMDLEALSN-- 375
              .|.........:||||||||.:.||.|  ||:..:.|:...|  |:|::||||:.:|..:.  
  Rat   354 --QKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQ 416

  Fly   376 --YFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTI- 437
              :.....|:.||.|.|.|:::.                       .|.||.:    .|.|... 
  Rat   417 RLFTTPPPVIKVESRQFPVTVHF-----------------------NKRTPLD----DYSGECFR 454

  Fly   438 ----VHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLP------------- 485
                :|                |...||.::|:|.|.:::.:|..||..:.|             
  Rat   455 KVCKIH----------------RMLPAGGILVFLTGQAEVHALCRRLRKAFPIRCSQPQEMEEDS 503

  Fly   486 -----------------------------------------RE---------------------- 487
                                                     ||                      
  Rat   504 AEGMRRFKKSRTRARKAQAMALPQINLDNYSVLPAGEGDEDREAEMDDEEEALGSDLDLDLGDSE 568

  Fly   488 -----------QITIILLHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTG 540
                       .:.::.|:|.:...:|.:||:..| |.|| .:::||:.:||:|||.:.||:|.|
  Rat   569 ANEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRL-CVIATNVAETSLTIPGIKYVVDCG 632

  Fly   541 LAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRT 605
            ..|.:.||.....|...:||:|||.|.||||||||...|:|||||.:........:..|||.||.
  Rat   633 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRP 697

  Fly   606 LDEICLLTKLAAPDKKIENF------------------LAL-ALDTPPKDAVMQSCSRLKLLGVL 651
            ::::.|..| |...:|:.||                  :|| ||..|||.      .|:|.|.:.
  Rat   698 VEDLILQMK-ALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQ------ERMKKLQMS 755

  Fly   652 DERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQI 716
            .....:|.||..::..|:..:..|.|..|....||...|.|.|..:||:.|. .::|...|.:::
  Rat   756 QLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFE-ELDRPAASEEEL 819

  Fly   717 SRV------------LFAGDGMSDSLAVIKLYEEFTNLKRKDIG---------DFCERNFICRNA 760
            :.:            .:||.|.|     :||.:....|..  :|         .||:.|.:...|
  Rat   820 AELKGRRTRVAQMKRTWAGQGAS-----LKLGDLMVLLGA--VGACEYAGCSPQFCQANGLRYKA 877

  Fly   761 MEMFVSAASTLRDTVYRIFRFSEA----SARLASSFNNDTNMIRLALTAGLYPKLA-------YM 814
            |.........|...|..:  ..||    ..::.....:....:|..:.|||...||       .:
  Rat   878 MLEIRRLRGQLTTAVNAV--CPEAGLFLDPKMQPPTESQVTYLRQIMAAGLGDHLARRVQSEDLL 940

  Fly   815 DRENKNQLVAEGDPL----VQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVSG 875
            |.:.||   |...||    |.:..||.|     .::| .|::::.|...|.........|..:..
  Rat   941 DPKWKN---AYKTPLLDDPVFIHPSSVL-----FREL-PEFVVYQEIVETTKMYMKGVSTVEIQW 996

  Fly   876 LMVALAGGKRFITEAHGSEMLLCLDSWIRLKC-------------PA---EF--GLQLHK--VRM 920
            :...|....:|...........|.:|. |:.|             ||   :|  |:..:|  .|.
  Rat   997 IPSLLPSYCQFDAPLEEPAPTYCPESG-RVLCHRASVFYRVGWPLPAVQVDFPEGIDRYKYFARF 1060

  Fly   921 LTDREFAKLVATRKLSLMSD---------FIGP--ETVRRLL---EADVPSTCLAEGK 964
            |.:.:..:.:|:.|..|:|.         .:.|  ||:.|.|   :||...:.||..|
  Rat  1061 LLEGQVFRKLASFKSCLLSSPNTMLKTWARLQPRTETLLRALVAQKADSRDSLLAAWK 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 11/63 (17%)
DEXDc 214..395 CDD:214692 63/190 (33%)
DEXDc 226..368 CDD:238005 54/147 (37%)
HELICc 479..575 CDD:197757 41/183 (22%)
HA2 648..733 CDD:214852 22/96 (23%)
OB_NTP_bind 783..884 CDD:285018 24/115 (21%)
Dhx37NP_001099396.2 HrpA 236..1009 CDD:224557 211/848 (25%)
DEXDc 267..407 CDD:238005 54/145 (37%)
HELICc 578..667 CDD:197757 36/89 (40%)
HA2 730..781 CDD:282288 15/56 (27%)
HA2 761..852 CDD:214852 23/96 (24%)
OB_NTP_bind 887..1004 CDD:285018 26/127 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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