DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx8

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_006247348.1 Gene:Dhx8 / 287727 RGDID:1310723 Length:1242 Species:Rattus norvegicus


Alignment Length:845 Identity:240/845 - (28%)
Similarity:390/845 - (46%) Gaps:127/845 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EDEKMLRQLVDDFLQSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPE-------------- 114
            |||.:..:||::     ||    |.|    |.|..:......:|.| |.|:              
  Rat   455 EDEDLEIELVEE-----EP----PFL----RGHTKQSMDMSPIKIV-KNPDGSLSQAAMMQSALA 505

  Fly   115 -ENRVLFISRPQSDGQQQYILCNTKLDICPPLLDVLG-QMAGNVERRLMNSVGDLKCNKQQYKDI 177
             |.|.|  .:.|.:.:...|..........||.|..| |:|.|     |..:|.:..:..::|..
  Rat   506 KERREL--KQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAAN-----MRGIGMMPNDIPEWKKH 563

  Fly   178 RLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQL 242
            ....|....|::        ...:|..:|.||||||.:|.::..:..:|:||:.|.|||||:||:
  Rat   564 AFGGNKASYGKK--------TQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQI 620

  Fly   243 PQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLT 307
            .||:.|  |.:.:..:|..:||||:||:||::|:|:|.|...|..|||.||.....|..||:...
  Rat   621 TQYLAE--AGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYM 683

  Fly   308 TSGCLLRALAMDKKSFFKNTTHLII--DEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDL 370
            |.|.|||...:|...    |.:.||  ||||||.:.||.|....|..:||...::|::.|||:|.
  Rat   684 TDGMLLRECLIDPDL----TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA 744

  Fly   371 EALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGN 435
            ...|.||....:..:.||::.|.|.:.                       ||..::.|.|     
  Rat   745 VKFSQYFYEAPIFTIPGRTYPVEILYT-----------------------KEPETDYLDA----- 781

  Fly   436 TIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTS----LLARLESSLPR-EQITIILLH 495
                      .:::::::.|.: ..|.::|:|.|..::.:    |..|::|..|. .::.|:.::
  Rat   782 ----------SLITVMQIHLTE-PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 835

  Fly   496 SQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTW 560
            |.:.:..|.::|...|....|::::|||.:||:||..:.||:|.|..|.|.|:|.....||.:|.
  Rat   836 SALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTP 900

  Fly   561 ISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYT--IPEIMRRTLDEICLLTKLAAPDKKIE 623
            ||||.||||||||||...|.||||| .:|..|..:.|  :|||.|..|....|..|...    |.
  Rat   901 ISQAQAKQRAGRAGRTGPGKCYRLY-TERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG----IN 960

  Fly   624 NFLAL-ALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLD 687
            :.|:. .:|.||.:.::.:..:|..||.||:...:|.||..:||.||...:.|.|:.|::|.|.:
  Rat   961 DLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSE 1025

  Fly   688 SMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGDFCE 752
            .|:.|.:..||::.|....::...:.|:.:: ....:|  |.|.::.:|..:.|  .|....:|.
  Rat  1026 EMLTIVSMLSVQNVFYRPKDKQALADQKKAK-FHQTEG--DHLTLLAVYNSWKN--NKFSNPWCY 1085

  Fly   753 RNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDTNMIRLALTAGLYPKLAYMD-R 816
            .|||...::.    .|..:|..:..|....:..   ..|....|..::.|:.:|.:...|..| :
  Rat  1086 ENFIQARSLR----RAQDIRKQMLGIMDRHKLD---VVSCGKSTVRVQKAICSGFFRNAAKKDPQ 1143

  Fly   817 ENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVSGLMVALA 881
            |....|:.:  .:|.:..||.|..::      .||:::.|...|..:... |.||:....:|..|
  Rat  1144 EGYRTLIDQ--QVVYIHPSSALFNRQ------PEWVVYHELVLTTKEYMR-EVTTIDPRWLVEFA 1199

  Fly   882  881
              Rat  1200  1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 18/73 (25%)
DEXDc 214..395 CDD:214692 70/182 (38%)
DEXDc 226..368 CDD:238005 61/143 (43%)
HELICc 479..575 CDD:197757 39/96 (41%)
HA2 648..733 CDD:214852 25/84 (30%)
OB_NTP_bind 783..884 CDD:285018 21/100 (21%)
Dhx8XP_006247348.1 S1_DHX8_helicase 287..365 CDD:240189
DEXDc 583..768 CDD:214692 77/190 (41%)
DEXDc 604..742 CDD:238005 61/143 (43%)
HELICc 767..924 CDD:238034 55/195 (28%)
HA2 986..1068 CDD:214852 25/84 (30%)
OB_NTP_bind 1102..1201 CDD:285018 22/110 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.