DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and Dhx40

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001005873.1 Gene:Dhx40 / 287595 RGDID:1359618 Length:779 Species:Rattus norvegicus


Alignment Length:856 Identity:229/856 - (26%)
Similarity:383/856 - (44%) Gaps:168/856 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 RLPSNFGLVGQRLIPPPQSNRNRNIQHERRS----------------------LPIYKQRESILN 220
            |.|:..|...:|   ..:..|...:|.||.|                      .||.|||:.::.
  Rat     3 RFPAVAGRAPRR---QEEGERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQ 64

  Fly   221 VLQRDQVLIIKGATGSGKSTQLPQYILEWA-AEHRAPVRIVVSQPRRIAAISVSERISKERGEAP 284
            .::.:..||:.|.|||||:||||:|:.|.. ::|.   .|.|:|||::|||||::|:::|.....
  Rat    65 AVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG---MIGVTQPRKVAAISVAQRVAEEMKCTL 126

  Fly   285 GTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLL-LA 348
            |:.|||.:|.:...|..|.:...|.||||:.:..|..  ....:.:|:||||||.|.||.|. |.
  Rat   127 GSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPN--LNKFSVIILDEAHERTLTTDILFGLL 189

  Fly   349 TKLELQKNP----HLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGYMHP 409
            .||...|:|    ||::|:|||||:|..||.:||...:.|:.||                  ::|
  Rat   190 KKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR------------------LYP 236

  Fly   410 RMEKF--LGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSD 472
            ..|||  |..|..:|..:.:.|       ||...:|    :.|.|:      ||.::|:|.|..:
  Rat   237 VREKFCNLIGPRDRENTAYIQA-------IVKVTMD----IHLNEM------AGDILVFLTGQFE 284

  Fly   473 M---TSLLARLESSLPREQ---------ITIILLHSQVDNSEQRKVF-RTYPGVRLKIILSTNIG 524
            :   ..||.::..|:..:.         :.|:..:..:...:||::| ...||:| |.::||||.
  Rat   285 IEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIR-KCVISTNIS 348

  Fly   525 QTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDR 589
            .||:||..:.||:|.|..|...::..:....|.:..||:::|.||:|||||...|.|:|:|..|.
  Rat   349 ATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDF 413

  Fly   590 MAR-MNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALA-LDTPPKDAVMQSCSRLKLLGVLD 652
            ..: |..:.||||.|.:|..:.|..|..|    |.:.:... ||.|.:..::::..:|.....:|
  Rat   414 WNQCMPDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474

  Fly   653 ERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIE-RGKKSGQQI 716
            ....||.||..:.|.||...:...::.:..|.|.|.::.|||..||.:.|:..:: ..:|..:|.
  Rat   475 RSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQK 539

  Fly   717 SRVLFA-GDGMSDSLAVIKLYEEFTNLKRKDIG---DFCERNFICRNAMEMFVSAASTLRDTVYR 777
            .|.|.| ..|.:|...:..::|:.     |..|   .:|::::|....:.......:.||:.:.:
  Rat   540 HRELAAKAGGFNDFATLAVIFEQC-----KSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRK 599

  Fly   778 IFRFSEASARLASSFNNDT------NMIRLALTAGLYPKLAYMDRENKNQ----LVAEGDPLVQV 832
            :        :..|.|..:|      .::|..|.||.:..:|   |.:..:    :...|.| |.:
  Rat   600 L--------KQQSDFPRETFEGPKHEVLRRCLCAGYFKNVA---RRSVGRTFCTMDGRGSP-VHI 652

  Fly   833 SRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKRFITEAHGSEMLL 897
            ..||.|.    :::...|||:|              |..||:             |:.:...:..
  Rat   653 HPSSALH----EQETKLEWIIF--------------HEVLVT-------------TKVYARIVCP 686

  Fly   898 CLDSWIRLKCPAEFGLQLHKVRMLTDREF---AKLVATRK--LSLMSDFIGPETVRRLLEADVPS 957
            ....|:|...|....|..|.:..:..||.   |:...|.|  :..:.|.|..|.::::...:   
  Rat   687 IRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWTNKENVKQLKDGISKEVLKKMQRRN--- 748

  Fly   958 TCLAEGKSLLD 968
                :.||:.|
  Rat   749 ----DDKSISD 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064
DEXDc 214..395 CDD:214692 74/186 (40%)
DEXDc 226..368 CDD:238005 62/147 (42%)
HELICc 479..575 CDD:197757 31/105 (30%)
HA2 648..733 CDD:214852 24/86 (28%)
OB_NTP_bind 783..884 CDD:285018 22/110 (20%)
Dhx40NP_001005873.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 9/52 (17%)
HrpA 51..750 CDD:224557 217/798 (27%)
DEAH box 173..176 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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