DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8915 and rha-2

DIOPT Version :10

Sequence 1:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_498895.1 Gene:rha-2 / 176207 WormBaseID:WBGene00015525 Length:1148 Species:Caenorhabditis elegans


Alignment Length:1073 Identity:251/1073 - (23%)
Similarity:410/1073 - (38%) Gaps:321/1073 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RKKAQPMPEQAVVLVVNGRVTGGPKGTGKQKTRPGKNAKADAGDKLKS-EDEKMLRQLVDDFLQS 79
            |||.:...|::        .|||.|.....|.:........|..||.: :..|.|:|        
 Worm    28 RKKLEKSGEKS--------ATGGKKNRNFAKEKEVAKLTKQAKRKLAAVQSRKALKQ-------- 76

  Fly    80 CEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPE------ENRVLFISRPQSDG---QQQYI-- 133
             ..|:...||.:.|.. ..:|.|......:||.||      |...:|..:.:::.   ||.|.  
 Worm    77 -TQEELFAGLAEFQLD-PSKLCQLSSSTKLSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQDYYPT 139

  Fly   134 ---------------------LCNT-KLDICP-PLLDVLGQMAGNVERRLMNSVGDLKCNKQQYK 175
                                 ..|| ::.|.| .|.||...:.||.|..|...|  :|....:..
 Worm   140 DDESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDEAIDGNPETNLDQIV--VKREDDEES 202

  Fly   176 D----IRLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGS 236
            |    :.||:...:..:::|    ..|::.||..|..|||:.:...|:..:..:.|.::.|.|||
 Worm   203 DNEDILALPTTTVINRKKVI----VERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGS 263

  Fly   237 GKSTQLPQYILE--WAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCS 299
            ||:||:||::.|  :|:|...   |.:::|||:|||::::|:..|.  |....|.|.||.....|
 Worm   264 GKTTQIPQFLYEAGYASEGEL---IGITEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGTRS 323

  Fly   300 SNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFL--LLATKLELQKNP--HLR 360
            ..|.::..|.|.|::  .|::....|..:.::|||||||.:.:|.|  :|:..:.|:...  .||
 Worm   324 ETTNILFMTDGVLMK--EMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLR 386

  Fly   361 LVLMSATMDLEALSN--YFGGGT--VMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGK 421
            ||:||||:.|:..::  .|...|  |:.|:.|.|.||: |.|                      |
 Worm   387 LVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSV-HFE----------------------K 428

  Fly   422 ETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLP- 485
            .||.:.:|:.:.....:|..:                ..||::|::.|..::..|:.:|:...| 
 Worm   429 RTPDDYIASAFRKTCRIHETL----------------PPGAILVFVTGQHEVKQLITKLKKRYPV 477

  Fly   486 ----------------------------------------------------------------- 485
                                                                             
 Worm   478 VYETDKNGEVLVKGTKEWKEKKVEAAKSIKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAAEA 542

  Fly   486 -----------------------------REQITIILLHSQVDNSEQRKVFRTYP-GVRLKIILS 520
                                         .|.:..:.|:|.:...:||:||...| |:|| .::|
 Worm   543 FDDYEEFENGDGDLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRL-CVIS 606

  Fly   521 TNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLY 585
            ||:.:||:|||.:.||||.|..|.:.|||....|:..:..||||...||||||||:..|:.||||
 Worm   607 TNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLY 671

  Fly   586 DNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSC-SRLKLLG 649
            .:........:..|||:.:..|::.|..| :....|:.||   ...:.|.:.:::|. .||..||
 Worm   672 SSAVYQDFVKFADPEILSKPADQLVLHLK-SMNIVKVVNF---PFPSAPDEQMLESAEKRLCRLG 732

  Fly   650 VLDERDE-------VTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIE 707
            .|.|..:       :|.||..:|..||.....|.:..:.....:...|::.:..|||:|.:    
 Worm   733 ALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLI---- 793

  Fly   708 RGKKSGQQISRVLFAGDGMSDSLAVIK--LYE-----EFTNLKRKDIGDF--------------- 750
                   .:|.:  .||...::..::|  |.|     ..|..:|  :||.               
 Worm   794 -------PVSSL--RGDTPEETKELMKNVLKERRRWCSHTGARR--LGDLKVLMHAASVAEQIKY 847

  Fly   751 ----CERNFICRNAMEMFVSA---ASTLRDTVYRIFRFS---EASARLASSF----NNDTNMIRL 801
                ||:       :.:.|.|   |..||..:..|...|   |.:|.|.|..    :....::|.
 Worm   848 NARECEK-------VGLRVKALVEARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQ 905

  Fly   802 ALTAGLYPKLA-YMDRENKNQLVAEG-------------DP----------------LVQVSR-- 834
            .:.|....:|| .:||....:.|.:|             ||                ||||:.  
 Worm   906 MVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKK 970

  Fly   835 ---SSCLRGKKKQKDLASEWILFVEKTRTADQI 864
               |.|...|:....||..:..:.|:.:..:.|
 Worm   971 LMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPI 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_573208.1 R3H 67..123 CDD:460206 15/61 (25%)
HrpA 208..>702 CDD:441249 155/607 (26%)
OB_NTP_bind 799..884 CDD:400182 21/101 (21%)
rha-2NP_498895.1 HrpA 234..>1020 CDD:441249 200/843 (24%)

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