DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8915 and rha-2

DIOPT Version :9

Sequence 1:NP_001285369.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_498895.1 Gene:rha-2 / 176207 WormBaseID:WBGene00015525 Length:1148 Species:Caenorhabditis elegans


Alignment Length:1073 Identity:251/1073 - (23%)
Similarity:410/1073 - (38%) Gaps:321/1073 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RKKAQPMPEQAVVLVVNGRVTGGPKGTGKQKTRPGKNAKADAGDKLKS-EDEKMLRQLVDDFLQS 79
            |||.:...|::        .|||.|.....|.:........|..||.: :..|.|:|        
 Worm    28 RKKLEKSGEKS--------ATGGKKNRNFAKEKEVAKLTKQAKRKLAAVQSRKALKQ-------- 76

  Fly    80 CEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPE------ENRVLFISRPQSDG---QQQYI-- 133
             ..|:...||.:.|.. ..:|.|......:||.||      |...:|..:.:::.   ||.|.  
 Worm    77 -TQEELFAGLAEFQLD-PSKLCQLSSSTKLSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQDYYPT 139

  Fly   134 ---------------------LCNT-KLDICP-PLLDVLGQMAGNVERRLMNSVGDLKCNKQQYK 175
                                 ..|| ::.|.| .|.||...:.||.|..|...|  :|....:..
 Worm   140 DDESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDEAIDGNPETNLDQIV--VKREDDEES 202

  Fly   176 D----IRLPSNFGLVGQRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGS 236
            |    :.||:...:..:::|    ..|::.||..|..|||:.:...|:..:..:.|.::.|.|||
 Worm   203 DNEDILALPTTTVINRKKVI----VERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGS 263

  Fly   237 GKSTQLPQYILE--WAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCS 299
            ||:||:||::.|  :|:|...   |.:::|||:|||::::|:..|.  |....|.|.||.....|
 Worm   264 GKTTQIPQFLYEAGYASEGEL---IGITEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGTRS 323

  Fly   300 SNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFL--LLATKLELQKNP--HLR 360
            ..|.::..|.|.|::  .|::....|..:.::|||||||.:.:|.|  :|:..:.|:...  .||
 Worm   324 ETTNILFMTDGVLMK--EMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLR 386

  Fly   361 LVLMSATMDLEALSN--YFGGGT--VMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGK 421
            ||:||||:.|:..::  .|...|  |:.|:.|.|.||: |.|                      |
 Worm   387 LVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSV-HFE----------------------K 428

  Fly   422 ETPSELLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLP- 485
            .||.:.:|:.:.....:|..:                ..||::|::.|..::..|:.:|:...| 
 Worm   429 RTPDDYIASAFRKTCRIHETL----------------PPGAILVFVTGQHEVKQLITKLKKRYPV 477

  Fly   486 ----------------------------------------------------------------- 485
                                                                             
 Worm   478 VYETDKNGEVLVKGTKEWKEKKVEAAKSIKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAAEA 542

  Fly   486 -----------------------------REQITIILLHSQVDNSEQRKVFRTYP-GVRLKIILS 520
                                         .|.:..:.|:|.:...:||:||...| |:|| .::|
 Worm   543 FDDYEEFENGDGDLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRL-CVIS 606

  Fly   521 TNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLY 585
            ||:.:||:|||.:.||||.|..|.:.|||....|:..:..||||...||||||||:..|:.||||
 Worm   607 TNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLY 671

  Fly   586 DNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSC-SRLKLLG 649
            .:........:..|||:.:..|::.|..| :....|:.||   ...:.|.:.:::|. .||..||
 Worm   672 SSAVYQDFVKFADPEILSKPADQLVLHLK-SMNIVKVVNF---PFPSAPDEQMLESAEKRLCRLG 732

  Fly   650 VLDERDE-------VTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIE 707
            .|.|..:       :|.||..:|..||.....|.:..:.....:...|::.:..|||:|.:    
 Worm   733 ALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLI---- 793

  Fly   708 RGKKSGQQISRVLFAGDGMSDSLAVIK--LYE-----EFTNLKRKDIGDF--------------- 750
                   .:|.:  .||...::..::|  |.|     ..|..:|  :||.               
 Worm   794 -------PVSSL--RGDTPEETKELMKNVLKERRRWCSHTGARR--LGDLKVLMHAASVAEQIKY 847

  Fly   751 ----CERNFICRNAMEMFVSA---ASTLRDTVYRIFRFS---EASARLASSF----NNDTNMIRL 801
                ||:       :.:.|.|   |..||..:..|...|   |.:|.|.|..    :....::|.
 Worm   848 NARECEK-------VGLRVKALVEARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQ 905

  Fly   802 ALTAGLYPKLA-YMDRENKNQLVAEG-------------DP----------------LVQVSR-- 834
            .:.|....:|| .:||....:.|.:|             ||                ||||:.  
 Worm   906 MVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKK 970

  Fly   835 ---SSCLRGKKKQKDLASEWILFVEKTRTADQI 864
               |.|...|:....||..:..:.|:.:..:.|
 Worm   971 LMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPI 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8915NP_001285369.1 R3H 64..123 CDD:100064 15/64 (23%)
DEXDc 214..395 CDD:214692 64/190 (34%)
DEXDc 226..368 CDD:238005 53/147 (36%)
HELICc 479..575 CDD:197757 41/191 (21%)
HA2 648..733 CDD:214852 19/91 (21%)
OB_NTP_bind 783..884 CDD:285018 25/121 (21%)
rha-2NP_498895.1 HrpA 218..989 CDD:224557 203/847 (24%)
DEXDc 254..394 CDD:238005 53/146 (36%)
P-loop_NTPase <350..>477 CDD:304359 41/165 (25%)
HELICc 577..662 CDD:197757 39/85 (46%)
HA2 730..822 CDD:214852 22/104 (21%)
OB_NTP_bind 870..990 CDD:285018 25/119 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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