DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18258 and Pla1a

DIOPT Version :9

Sequence 1:NP_573201.1 Gene:CG18258 / 32708 FlyBaseID:FBgn0265267 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_620237.1 Gene:Pla1a / 85311 RGDID:621261 Length:456 Species:Rattus norvegicus


Alignment Length:355 Identity:97/355 - (27%)
Similarity:135/355 - (38%) Gaps:71/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SSYQEALLNRLQDQLNQFVVGLPLDLGFSTLNYICSTIVDLGVVRSKLIPDMSRMSFLLRSSDDC 182
            :.:|.|.|.|..:...||::..|.|.|       |..:|:                    ...|.
  Rat    36 TDFQSANLLRGTNLKVQFLLFTPSDPG-------CGQLVE--------------------EDSDI 73

  Fly   183 QNTSIPLTQAEQLWNTTGFYQDRPTVLFITGW-TTSINNSNSGPVAKAYLCRNDTNVLILDAANF 246
            :|:.              |.....|.|.|.|: ......|......:|.|...|.||:.:|....
  Rat    74 RNSE--------------FNASLGTKLIIHGFRALGTKPSWINKFIRALLRAADANVIAVDWVYG 124

  Fly   247 IDTLYTWSALNTEV-----IGDYLAKALLRLNTSYVTKQFHLVGHSLGAQIAGSAGRNYRRLSGG 306
            ...:| :||:...|     |..:|:| ||.|..|  ....|::|.||||.:.|..|..|:    |
  Rat   125 STGMY-FSAVENVVKLSLEISRFLSK-LLELGVS--ESSIHIIGVSLGAHVGGMVGHFYK----G 181

  Fly   307 QILKRITGLDPANPCFYDGNELEGLRSGDARFVDIIHTNPGMFGTSKRAGDADFFVQGRIPFKPG 371
            | |.||||||||.|.:...:..|.|.||||.||:.|||:....|.....|..|:||.|. ..:||
  Rat   182 Q-LGRITGLDPAGPEYTRASLEERLDSGDALFVEAIHTDTDNLGIRIPVGHVDYFVNGG-QDQPG 244

  Fly   372 CESL-----DPISCSHQRAVDYWTETVYPSNGNDFLAKRCKRYSELLLGNY--CKNTNTVMGYAA 429
            |.:.     ..:.|.|.|||..:...:  .|....:|..|..|...|.|:.  |.|.     :..
  Rat   245 CPAFIHAGYSYLICDHMRAVHLYISAL--ENTCPLMAFPCASYKAFLAGDCLDCFNP-----FLL 302

  Fly   430 KATDLGLFYVGANPEEPYGQNANLQSYTNS 459
            ....:||...|....||..:...:...|.|
  Rat   303 SCPRIGLVERGGVKIEPLPKEVRVYLQTTS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18258NP_573201.1 Pancreat_lipase_like 172..443 CDD:238363 82/283 (29%)
Pla1aNP_620237.1 Lipase 14..336 CDD:278576 97/355 (27%)
Pancreat_lipase_like 49..332 CDD:238363 92/340 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338892
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.