DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18258 and LPL

DIOPT Version :9

Sequence 1:NP_573201.1 Gene:CG18258 / 32708 FlyBaseID:FBgn0265267 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_000228.1 Gene:LPL / 4023 HGNCID:6677 Length:475 Species:Homo sapiens


Alignment Length:310 Identity:89/310 - (28%)
Similarity:133/310 - (42%) Gaps:48/310 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 FLLRSSDDCQNTSIPLTQ--AEQLWNTTGFYQDRPTVLFITGWTTSINNSNSGP--VAKAYLCRN 234
            |.||:.:|....:..|..  ||.: .|..|.....|.:.|.|||.:....:..|  ||..|....
Human    41 FALRTPEDTAEDTCHLIPGVAESV-ATCHFNHSSKTFMVIHGWTVTGMYESWVPKLVAALYKREP 104

  Fly   235 DTNVLILDAANFIDTLYTWSALNTEVIGDYLAKAL--LRLNTSYVTKQFHLVGHSLGAQIAGSAG 297
            |:||:::|..:.....|..||..|:::|..:|:.:  :....:|.....||:|:||||..||.||
Human   105 DSNVIVVDWLSRAQEHYPVSAGYTKLVGQDVARFINWMEEEFNYPLDNVHLLGYSLGAHAAGIAG 169

  Fly   298 RNYRRLSGGQILKRITGLDPANPCFYDGNELEGLRSGDARFVDIIHT----NPG-MFGTSKRAGD 357
                .|:..:: .||||||||.|.|........|...||.|||::||    :|| ..|..|..|.
Human   170 ----SLTNKKV-NRITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSPGRSIGIQKPVGH 229

  Fly   358 ADFFVQGRIPFKPGCE--------------SLDP-ISCSHQRAVDYWTETVYPSNGNDFLAKRCK 407
            .|.:..|. .|:|||.              .:|. :.|||:|::..:.:::. :..|...|.||.
Human   230 VDIYPNGG-TFQPGCNIGEAIRVIAERGLGDVDQLVKCSHERSIHLFIDSLL-NEENPSKAYRCS 292

  Fly   408 RYSELLLG-------NYCKNTNTVMGY---AAKATDLGLFYVGANPEEPY 447
            .......|       |.|.|    :||   ..:|......|:....:.||
Human   293 SKEAFEKGLCLSCRKNRCNN----LGYEINKVRAKRSSKMYLKTRSQMPY 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18258NP_573201.1 Pancreat_lipase_like 172..443 CDD:238363 87/304 (29%)
LPLNP_000228.1 Interaction with GPIHBP1. /evidence=ECO:0000269|PubMed:30559189 32..53 4/11 (36%)
Lipase 33..473 CDD:332983 89/310 (29%)
Essential for determining substrate specificity. /evidence=ECO:0000269|PubMed:7592706 243..266 2/22 (9%)
Important for interaction with lipoprotein particles. /evidence=ECO:0000269|PubMed:27929370 417..421
Important for heparin binding. /evidence=ECO:0000269|PubMed:11342582 430..434
Interaction with GPIHBP1. /evidence=ECO:0000269|PubMed:26725083, ECO:0000269|PubMed:30559189 443..467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145362
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.